Publications
La Rosa F., Dos Santos Silva J., Dereskewicz E., Invernizzi A., Cahan N., Galasso J., Garcia N., Graney R., Levy S., Verma G., Balchandani P., Reich D.S., Horton M., Greenspan H., Sumowski J., Bach Cuadra M., Beck E.S.. BrainAgeNeXt: Advancing brain age modeling for individuals with multiple sclerosis - Imaging Neuroscience, 3: , 25 February 2025
Richiardi J., Ravano V., Molchanova N., Gordaliza P. M., Kober T., Bach Cuadra M.. Domain shift, domain adaptation, and generalization: A focus on MRI - Trustworthy AI in Medical Imaging, Chapter 6: 127-151, 17 January 2025
Ge Y., Antiochos P., Bernhard B., Heydari B., Steel K., Bingham S., Mikolich J. R., Arai A. E., Bandettini W. P., Patel A. R., Shanbhag S. M., Farzaneh-Far A., Heitner J. F., Shenoy C., Leung S. W., Gonzalez J. A., Shah D. J., Raman S. V., Ferrari V. A., Schulz-Menger J., Stuber M., Simonetti O. P., Kwong R. Y.. Stress CMR Perfusion Imaging in the Medicare-Eligible Population: Insights From the SPINS Study - JACC: Cardiovascular Imaging, 18(1): 33-44, 6 January 2025
Songeon J., Lazeyras F., Agius T., Dabrowski O., Ruttimann R., Toso C., Longchamp A., Klause, A., Courvoisier S.. Improved phosphorus MRSI acquisition through compressed sensing acceleration combined with low-rank reconstruction - MAGMA, : , 27 December 2024
Boccalini C., Dodich A., Scheffler M., Laganà V., Fratto E., Frisoni G. B., Bruni A. C., Colao R., Perani D., Garibotto V.. In Vivo Tau and Neurodegeneration Imaging in a Family With the Presenilin 1 Met146Leu Pathogenic Variant - Neurology, 103(13): , 24 December 2024
Pelentritou A., Cataldi J., Zubler F., Iten M., Haenggi M., Ben-Hamouda M., Rossetti A. O., Tzovara A., De Lucia M.. Complex auditory regularity processing across levels of consciousness in coma: Stage 1 Registered Report - Brain Communications, 7(1): , 21 December 2024
Gut P., Cochet H., Caluori G., El-Hamrani D., Constantin M., Vlachos K., Sridi S., Antiochos P., Schwitter J., Masi A., Sacher F., Jaïs P., Stuber M., Bustin A.. Improved myocardial scar visualization using free-breathing motion-corrected wideband black-blood late gadolinium enhancement imaging in patients with implantable cardiac devices - Diagnostic and Interventional Imaging, : , 12 December 2024
Mach M., Amico E., Liégeois R., Preti M. G., Griffa A., Van De Ville D., Pedersen M.. Connectome embedding in multidimensional graph spaces - Network Neuroscience, 8(4): 1129–1148, 10 December 2024
Sieber X., Romanin L., Bastiaansen J. A. M., Roy C. W., Yerly J., Wenz D., Richiardi J., Stuber M., van Heeswijk R. B.. A flexible framework for the design and optimization of water-excitation RF pulses using B-spline interpolation - Magnetic Resonance in Medicine, : , 09 December 2024
Cai R., Ke L., Zhao Y., Zhao J., Zhang H., Zheng P., Xin L., Ma C., Lin Y.. NMR-based metabolomics combined with metabolic pathway analysis reveals metabolic heterogeneity of colorectal cancer tissue at different anatomical locations and stages - International Journal of Cancer, 156(8): 1644-1655, 04 December 2024
Celen Z., Murray R. J., Smith M. M., Jouabli S., Ivanova V., Pham E., Schilliger Z., Vuilleumier P., Merglen A., Klauser P., Piguet C.. Brain Reactivity and Vulnerability to Social Feedback Following Acute Stress in Early Adolescence - Brain and Behavior, 14(12): , 04 December 2024
Giovannoni L., Pierzchala K., De Roo M., Braissant O., Bruce S., McLin V. A., Vutskits L.. Effects of cholestasis and hyperammonemia on dendritic spine density and turnover in rat hippocampal neurons - Scientific Reports, 14(1): , 01 December 2024
Winther S., Lundell H., Rafael-Patiño J., Andersson M., Thiran J.-P., Dyrby T.B.. Susceptibility-induced internal gradients reveal axon morphology and cause anisotropic effects in the diffusion-weighted MRI signal - Scientific Reports, 14(1): , 28 November 2024
Manasseh G., Hilbert T., Fartaria M. J., Deverdun J., Bach Cuadra M., Maréchal B., Kober T., Dunet V.. Automated Quantitative Susceptibility and Morphometry MR Study: Feasibility and Interrelation Between Clinical Score, Lesion Load, Deep Grey Matter and Normal-Appearing White Matter in Multiple Sclerosis - MDPI Diagnostics, 14(23): 2669, 27 November 2024
Van Der Veek A., Loukas S., Lordier L., de Almeida J. S., Filippa M., Lazeyras F., Van De Ville D., Hüppi P. S.. Longitudinal functional brain connectivity maturation in premature newborn infants: Modulatory influence of early music enrichment - Imaging Neuroscience, 2: 1-18, 18 November 2024
Blanco R., Preti M. G., Koba C., Van De Ville D., Crimi, A.. Comparing structure–function relationships in brain networks using EEG and fNIRS - Scientific Reports, 14(28976): , 22 November 2024
Mackowiak A. L. C., Piccini D., van Heeswijk R. B., Hullin R., Grani C., Bastiaansen J.. Fat-free noncontrast whole-heart cardiovascular magnetic resonance imaging with fast and power-optimized off-resonant water-excitation pulses - Journal of Cardiovascular Magnetic Resonance, 26(2): , 20 November 2024
Collij L. E., Bollack A., La Joie R., Shekari M., Bullich S., Roé-Vellvé N., Koglin N., Jovalekic A., Garciá D. V., Drzezga A., Garibotto V., Stephens A. W., Battle M., Buckley C., Barkhof F., Farrar G., Gispert J. D.. Centiloid recommendations for clinical context-of-use from the AMYPAD consortium - Alzheimer's & Dementia, 20(12): 9037-9048, 20 November 2024
Molchanova N., Raina V., Malinin A., La Rosa F., Depeursinge A., Gales M., Granziera C., Muller H., Graziani M., Bach Cuadra M.. Structural-based uncertainty in deep learning across anatomical scales: Analysis in white matter lesion segmentation - Computers in Biology and Medicine, 184: , 15 November 2024
Liu X, Scherrer S., Egger S., Lim S-I., Lauber B., Jelescu I., Griffa A., Gambarota G., Taube W., Xin L.. Rebalance the Inhibitory System in the Elderly Brain: Influence of Balance Learning on GABAergic Inhibition and Functional Connectivity - Human Brain Mapping, 45(16): , 07 November 2024
Payette K., Steger C., Licandro R., de Dumast P., Li H.B., Barkovich M., Li L., Dannecker M., Chen C., Ouyang C., McConnell N., Miron A., Li Y., Uus A., Grigorescu I., Ramirez Gilliland P., Siddiquee M.M.R., Xu D., Myronenko A., Wang H., Huang Z., Ye J., Alenyà M., Comte V., Camara O., Masson J.-B., Nilsson A., Godard C., Mazher M., Qayyum A., Gao Y., Zhou H., Gao S., Fu J., Dong G., Wang G., Rieu Z., Yang H., Lee M., Płotka S., Grzeszczyk M.K., Sitek A., Vargas Daza L., Usma S., Arbelaez P., Lu W., Zhang W., Liang J., Valabregue R., Joshi A.A., Nayak K.N., Leahy R.M., Wilhelmi L., Dändliker A., Ji H., Gennari A.G., Jakovčić A., Klaić M., Adžić A., Marković P., Grabarić G., Kasprian G., Dovjak G., Rados M., Vasung L., Bach Cuadra M., Jakab A.. Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results - IEEE Transactions on Medical Imaging, 44(3): 1257 - 1272, 30 October 2024
Unser M.. From Kernel Methods to Neural Networks: A Unifying Variational Formulation - Foundations of Computational Mathematics, 24: 1779–1818, 17 October 2023
Segobin S., Haast R., Kumar V., Lella A., Alkemade A., Bach Cuadra M., Barbeau E., Felician O., Pergola G., Pitel A.-L., Saranathan M., Tourdias T., Hornberger M.. A roadmap towards standardized neuroimaging approaches for human thalamic nuclei - Nature Reviews Neuroscience, 25(12): 792-808, 17 October 2024
Voruz P., Orepic P., Coll S. Y., Haemmerli J., Blanke O., Péron J. A., Schaller K., Iannotti G. R.. Self-other voice discrimination task: A potential neuropsychological tool for clinical assessment of self-related deficits - Heliyon, 10(19): , 15 October 2024
Klauser A., Strasser B., Bogner W., Hingerl L., Courvoisier S., Schirda C., Rosen B. R., Lazeyras F., Andronesi O. C.. ECCENTRIC: A fast and unrestrained approach for high-resolution in vivo metabolic imaging at ultra-high field MR - Imaging Neuroscience, 2: 1-20, 15 October 2024
Spagnolo F., Molchanova N., Ocampo Pineda M., Melie-Garcia L., Bach Cuadra M., Granziera C., Andrearczyk V., Depeursinge A.. Exploiting XAI Maps to Improve MS Lesion Segmentation and Detection in MRI - International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI, : , Marrakesh, October 2024
Gordaliza P.M., Molchanova N., Wynen M., Maggi P., Cagol A., Graziera C., Bach Cuadra M.. Towards Longitudinal Characterization of Multiple Sclerosis Atrophy Employing SynthSeg Framework and Normative Modeling - Medical Image Computing and Computer Assisted Intervention - MICCAI, : , Marrakesh, October 2024
Molchanova N., Cagol A., Gordaliza P.M., Ocampo-Pineda M., Lu P.-J., Weigel M., Chen X., Depeursinge A., Granziera C., Müller H., Bach Cuadra M.. Interpretability of Uncertainty: Exploring Cortical Lesion Segmentation in Multiple Sclerosis - Medical Image Computing and Computer Assisted Intervention – MICCAI, : , Marrakech, October 2024
Sanchez T., Mihailov A., Gomez Y., Martí Juan G., Eixarch E., Jakab A., Dunet V., Koob M., Auzias G., Bach Cuadra M.. Assessing Data Quality on Fetal Brain MRI Reconstruction: A Multi-site and Multi-rater Study - International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), : , Marrakech, October 2024
Lin R., Kebiri H., Gholipour A., Chen Y., Thiran J.-Ph., Karimi D., Bach Cuadra M.. Ground-truth effects in learning-based fiber orientation distribution estimation in neonatal brains - International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI, : , Marrakech, October 2024
Yerly J., Roy C. W., Milani B., Eyre K., Raifee M. J., Stuber M.. High on sparsity: Interbin compensation of cardiac motion for improved assessment of left-ventricular function using 5D whole-heart MRI - Magnetic Resonance in Medicine, 93(3): 975-992, 9 October 2024
Montón Quesada I., Ogier A. C., Ishida M., Takafuji M., Ito H., Sakuma H., Romanin L., Roy C. W., Prša M., Richiardi J., Yerly J., Stuber M., van Heeswijk R. B.. Self-gated free-running 5D whole-heart MRI using blind source separation for automated cardiac motion extraction - Magnetic Resonance in Medicine, 93(3): 961-974, 09 October 2024
Bodenmann T.R., Gil N., Dorfner F.J., Cleveland M.C., Patel J.B., Bhat Brahmavar S., Guelen M.S., Pulido-Arias D., Kalpathy-Cramer J., Thiran J.-P., Rosen B.R., Gerstner E., Kim A. E., Bridge C. P.. Multimodal Deep Learning-Based Prediction of Immune Checkpoint Inhibitor Efficacy in Brain Metastases - MICCAI Workshop on Cancer Prevention through Early Detection, : , Marrakesh, 09 October 2024
Kapralov N., Jamshidi Idaji M., Stephani T., Studenova A., Vidaurre C., Ros T., Villringer A., Nikulin V.. Sensorimotor brain–computer interface performance depends on signal-to-noise ratio but not connectivity of the mu rhythm in a multiverse analysis of longitudinal data - Journal of Neural Engineering, 21(5): , 8 October 2024
Tiston L., Wenz D.. Improved receive performance of a 38-channel dipolectric antenna for neuroimaging at 7 Tesla using low-loss dielectrics - ESMRMB 40th Annual Scientific Meeting, : , Barcelona, October 2024
Widmaier M. S., Kaiser A., Baup S., Wenz D., Pierzchała K., Xiao Y., Huang Z., Jiang Y., Xin L.. Fast 3D 31P B1+ mapping with a weighted stack of spiral trajectory at 7 T - Magnetic Resonance in Medicine, 93(2): 481-489, 04 October 2024
Zalevskyi V., Sanchez T., Roulet M., Aviles Verdera J., Hutter J., Kebiri H., Bach Cuadra M.. Improving Cross-Domain Brain Tissue Segmentation in Fetal MRI with Synthetic Data - Medical Image Computing and Computer Assisted Intervention – MICCAI 2024, : , Marrakesh, October 2024
Hériard-Dubreuil B., Besson A., Cohen-Bacrie C., Thiran J.-P.. Enhancement of time-dependent coherent backscattering: Leveraging phase information - Physical Review B, 110: , 3 October 2024
Bocquillon C., Villarreal Haro J. L., Rafael-Lopez J., Thiran J.-P., Corouge I., Caruyer E.. Orientation dispersion estimated from multidimensional diffusion MRI: does it match simulated realistic microstructure? - ESMRMB 2024 - 40th Annual Meeting cientific European Society for Magnetic Resonance in Medecine and Biology, : , Barcelona, October 2024
Viñals R., Motta P., Thiran J.-P.. Enhancement of Ultrafast Ultrasound Images: a Performance Comparison Between CNN Trained with RF or IQ Images - 2024 IEEE Ultrasonics, Ferroelectrics, and Frequency Control Joint Symposium (UFFC-JS), : , Taipei, September 2024
Beuret S., Thiran J. P.. Using Windowed Radon Transform to Measure Local Coherence Independently of Speed-of-Sound Variations in Plane-Wave Imaging - 2024 IEEE Ultrasonics, Ferroelectrics, and Frequency Control Joint Symposium (UFFC-JS), : , Taipei, September 2024
Pievani M., Ribaldi F., Toussas K., Da Costa S., Jorge J., Reynaud O., Chicherio C., Blouin J. L., Scheffler M., Garibotto V., Jovicich J., Jelescu I. O., Frisoni G. B.. Resting-state functional connectivity abnormalities in subjective cognitive decline: A 7T MRI study - Neurobiology of Aging, 144: 104-113, 20 September 2024
Voser T., Martin M., Muriset I., Winkler M., Ledoux J.-B., Alemán-Gómez Y., Durand S.. Outcome Prediction by Diffusion Tensor Imaging (DTI) in Patients with Traumatic Injuries of the Median Nerve - Neurology International, 16(5): , 19 September 2024
Spagnolo F., Gordaliza P.M., Lu P.J., Ocampo Pineda M., Chen X., Weigel M., Wynen M., Absinta M., Maggi P., Bach Cuadra M., Andrearczyk V., Depeursinge A., Granziera C. 4o. Explainability in automatic Paramagnetic Rim Lesion classification - European Committee For Treatment And Research In Multiple Sclerosis, : , Copenhagen, September 2024
Wynen M., Vanden Bulcke C., Borrelli S., Gordaliza P.M., Stölting A., Macq B., Du Pasquier R., Filippi M., Absinta M., Reich D.S., Bach Cuadra M., Maggi P.. Towards Integration of the Central Vein Sign, Cortical Lesions and Paramagnetic Rim Lesions into Multiple Sclerosis Diagnosis: Insights from Explainable Machine Learning - European Committee for Treatment and Research in Multiple Sclerosis, : , Copenhagen, September 2024
Stampacchia S., Asadi S., Tomczyk S., Ribaldi F., Scheffler M., Lövblad K. O., Pievani M., Fall A. B., Preti M. G., Unschuld P. G., Van De Ville D., Blanke O., Frisoni G. B., Garibotto V., Amico E.. Fingerprints of brain disease: connectome identifiability in Alzheimer’s disease - Communications Biology, 7: 1169, 18 September 2024
Gomez Y., Valenzuela I., Marti G., Nakaki A., Crovetto F., Baud D., Sanchez T., Bach Cuadra M., Crispi F., Gratacos E., Eixarch E.. Fetal brain biometry and sulcal depth in uncomplicated pregnancies: an interrater correlation coefficient study in low- versus super-resolution MRI - International Society of Ultrasound in Obstetrics and Gynecology (ISUOG), : , Budapest, September 2024
Weiss E. K., Baraboo J., Rigsby C. K., Robinson J. D., Ma L., Falcao M. B. L., Roy C. W., Stuber M., Markl M.. Respiratory-resolved five-dimensional flow cardiovascular magnetic resonance : In-vivo validation and respiratory-dependent flow changes in healthy volunteers and patients with congenital heart disease - Journal of Cardiovascular Magnetic Resonance, 26(2): , 14 September 2024
Gomez Y., Valenzuela I., Marti G., Nakaki A., Crovetto F., Baud D., Sanchez T., Bach Cuadra M., Crispi F., Gratacos E., Eixarch E.. Fetal brain biometry and sulcal depth in uncomplicated pregnancies: an interrater correlation coefficient study in low- versus super-resolution MRI - Ultrasound in Obstetrics & Gynecology, 64: 90-90, 09 September 2024
Stampacchia S., Asadi S., Tomczyk S., Ribaldi F., Scheffler M., Lövblad K.O., Pievani M., Fall A.B., Preti M.G., Unschuld P.G., Van De Ville D., Blanke O., Frisoni G.B., Garibotto V., Amico E.. Longitudinal Analysis of Brain Function-Structure Dependencies in 22q11.2 Deletion Syndrome and Psychotic Symptoms - Biological Psychiatry: Cognitive Neuroscience and Neuroimaging, 9(9): 882-895, 5 September 2024
Clairis N., Barakat A., Brochard J., Xin L., Sandi C.. A neurometabolic mechanism involving dmPFC/dACC lactate in physical effort-based decision-making - Molecular Psychiatry, 30: 899–913, 30 August 2024
MacIver C. L., Jones D., Green K., Szewczyk-Krolikowski K., Doring A., Tax C. M. W., Peall K. J.. White Matter Microstructural Changes Using Ultra-Strong Diffusion Gradient MRI in Adult-Onset Idiopathic Focal Cervical Dystonia - Neurology, 103(4): , 17 August 2024
Viñals R., Thiran J.-P.. Sequential CNN-Based Enhancement of Ultrafast Ultrasound Imaging for Sparse Arrays - 2024 32nd European Signal Processing Conference (EUSIPCO), : , Lyon, August 2024
Goldman J. P., Jané P., Zaghir J., Pirazzo Andrade Teixeira E., Peretti D. E., Garibotto V., Lovis C.. Automatic Classification of Conclusions from Multi-Tracer Reports of PET Brain Imaging in Cognitive Impairment - Studies in Health Technology and Informatics, 316: 560-564, 22 August 2024
Dabrowski O., Falcone J.-L., Klauser A., Songeon J., Kocher M., Chopard B., Lazeyras F., Courvoisier S.. SISMIK for brain MRI: Deep-learning-based motion estimation and model-based motion correction in k-space - IEEE Transactions on Medical Imaging, 44(1): , 19 August 2024