Publications
Van De Ville D, Jhooti P, Haas T, Kopel R, Lovblad KO, Scheffler K, Haller S.. Recovery of the default mode network after demanding neurofeedback training occurs in spatio-temporally segregated subnetworks - NeuroImage, 63(4): 1775-81, December 2012
Thevenaz P, Sage D, Unser M. Bi-exponential edge-preserving smoother - IEEE Transactions on Image Processing, 21(9): 3924-36, September 2012
Seelamantula CS, Pavillon N, Depeursinge C, Unser M. Local demodulation of holograms using the Riesz transform with application to microscopy - Journal Of The Optical Society Of America A-Optics Image Science And Vision, 29(10): 2118-29, October 2012
Scharnowski F, Hutton C, Josephs O, Weiskopf N, Rees G. Improving Visual Perception through Neurofeedback - The Journal of Neuroscience, 32(49): 17830–17841, December 2012
Schaer M, Bach Cuadra M, Schmansky N, Fischl B, Thiran JP, Eliez S.. How to measure cortical folding from MR images: a step-by-step tutorial to compute local gyrification index - Journal of Visualized Experiments, (59): e3417, January 2012
Rüegsegger MB, Bach Cuadra M, Pica A, Amstutz CA, Rudolph T, Aebersold D, Kowal JH. StatisticalModeling of the Eye for Multimodal Treatment Planning for External Beam Radiation Therapy of Intraocular Tumors - International Journal of Radiation Oncology Biology Physics, 84(4): e541-7, November 2012
Richiardi J, Gschwind M, Simioni S, Annoni JM, Greco B, Hagmann P, Schluep M, Vuilleumier P, Van De Ville D. Classifying minimally disabled multiple sclerosis patients from resting state functional connectivity - NeuroImage, 62(3): 2021-33, September 2012
Reymond P, Vardoulis O, Stergiopulos N. Generic and patient-specific models of the arterial tree - Journal of Clinical Monitoring and Computing, 26(5): 375-82, October 2012
Puy G, Vandergheynst P, Gribonval R, Wiaux Y. Universal and efficient compressed sensing by spread spectrum and application to realistic Fourier imaging techniques - EURASIP Journal on Advances in Signal Processing, 6: 1-13, 2012
Scheffler K, Loktyushin A, Bause J, Aghaeifar A, Steffen T, Schölkopf B. Spread spectrum magnetic resonance imaging - Magnetic Resonance in Medicine, 82(3): 877-885, September 2019
Lemkaddem A, Daducci A, Vulliemoz S, O'Brien K, Lazeyras F, Hauf M, Wiest R, Meuli R, Seeck M, Krueger G, Thiran JP.. A multi-center study: Intra-scan and inter-scan variability of diffusion spectrum imaging - NeuroImage, 62(1): 87-94, August 2012
Gui L, Lisowski R, Faundez T, Huppi PS, Lazeyras F, Kocher M. Morphology-driven automatic segmentation of MR images of the neonatal brain - Medical Image Analysis, 16(8): 1565-79, December 2012
Granziera C, Daducci A, Meskaldji DE, Roche A, Maeder P, Michel P, Hadjikhani N, Sorensen AG, Frackowiak RS, Thiran JP, Meuli R, Krueger G. A new early and automated MRI-based predictor of motor improvement after stroke - Neurology, 79(1): 39-46, July 2012
Entezari A, Nilchian M, Unser M. A Box Spline Calculus for the Discretization of Computed Tomography Reconstruction Problems - IEEE Transactions on Medical Imaging, 31(8): 1532 - 1541, March 2012
Depeursinge A, Van de Ville D, Platon A, Geissbuhler A, Poletti PA, Muller H. Near-Affine-Invariant Texture Learning for Lung Tissue Analysis Using Isotropic Wavelet Frames - IEEE Transactions on Information Technology in Biomedicine, 16(4): 665-75, July 2012
Delattre BM1, Van De Ville D, Braunersreuther V, Pellieux C, Hyacinthe JN, Lerch R, Mach F, Vallée JP. High time-resolved cardiac functional imaging using temporal regularization for small animal on a clinical 3T scanner - IEEE Transactions on Biomedical Engineering, 59(4): 929-35, April 2012
Debbane M, Lazouret M, Lagioia A, Schneider M, Van De Ville D, Eliez S. Resting-state networks in adolescents with 22q11.2 deletion syndrome: Associations with prodromal symptoms and executive functions - Schizophrenia Research, 139(1-3): 33-9, August 2012
Daducci A, Gerhard S, Griffa A, Lemkaddem A, Cammoun L, Gigandet X, Meuli R, Hagmann P, Thiran JP. The connectome mapper: an open-source processing pipeline to map connectomes with MRI - PLOS One, 7(12): e48121, December 2012
Chenouard N, Unser M. 3D Steerable Wavelets in Practice - IEEE Transactions on Image Processing, 21(11): 4522 - 4533, June 2012
Carrillo RE, McEwen JD, Wiaux Y. Sparsity Averaging Reweighted Analysis (SARA): a novel algorithm for radio-interferometric imaging - Monthly Notices of the Royal Astronomical Society, 426: 1223-1234, July 2012
Cammoun L, Gigandet X, Meskaldji D, Thiran JP, Sporns O, Do KQ, Maeder P, Meuli R, Hagmann P.. Mapping the human connectome at multiple scales with diffusion spectrum MRI - Journal of Neuroscience Methods, 203(2): 386-97, January 2012
Binzoni T, Tchernin D, Richiardi J, Van De Ville D, Hyacinthe JN. Haemodynamic responses to temperature changes of human skeletal muscle studied by laser-Doppler flowmetry - Physiological Measurement, 33(7): 1181-97, July 2012
Van De Ville D, Kocher M. Nonlocal means with dimensionality reduction and SURE-based parameter selection - IEEE Transactions on Image Processing, 20(9): 2683 - 2690, October 2011
Unser M, Chenouard N, Van De Ville D. Steerable Pyramids and Tight Wavelet Frames in L(2)(R(d)) - IEEE Transactions on Image Processing, 20(10): 2705-21, October 2011
Seelamantula CS, Pavillon N, Depeursinge C, Unser M. Exact complex-wave reconstruction in digital holography - Journal of the Optical Society of America a-Optics Image Science and Vision, 28(6): 983-992, June 2011
Roche A, Ribes D, Bach-Cuadra M, Kruger G. On the convergence of EM-like algorithms for image segmentation using Markov random fields - Medical Image Analysis, 15(6): 830-9, December 2011
Richiardi J, Eryilmaz H, Schwartz S, Vuilleumier P, Van de Ville D. Decoding brain states from fMRI connectivity graphs - NeuroImage, 56(2): 616-26, May 2011
Puy G, Vandergheynst P, Wiaux Y. On Variable Density Compressive Sampling - IEEE Signal Processing Letters, 18(10): 595 - 598, August 2011
Meskaldji DE, Ottet MC, Cammoun L, Hagmann P, Meuli R, Eliez S, Thiran JP, Morgenthaler S.. Adaptive strategy for the statistical analysis of connectomes - PLOS One, 6(8): e23009, August 2011
McEwen JD, Wiaux Y, Eyers DM. Data compression on the sphere - Astronomy & Astrophysics, 538: 98, August 2011
McEwen JD, Wiaux Y. A Novel Sampling Theorem on the Sphere - IEEE Transactions on Signal Processing, 59(12): 5876 - 5887, August 2011
McEwen JD, Wiaux Y. Compressed sensing for wide-field radio interferometric imaging - Monthly Notices of the Royal Astronomical Society, 413(2): 1318-32, October 2010
Luisier F, Blu T, Unser M. Image Denoising in Mixed Poisson-Gaussian Noise - IEEE Transactions on Image Processing, 20(3): 696 - 708, September 2010
Khalidov I, Fadili J, Lazeyras F, Van De Ville D, Unser M. Activelets: Wavelets for sparse representation of hemodynamic responses - Signal Processing, 91(12): 2810-2821, December 2011
Karahanoglu FI, Bayram I, Van De Ville D. A Signal Processing Approach to Generalized 1-D Total Variation - IEEE Transactions on Signal Processing, 59(11): 5265 - 5274, August 2011
Hansen-Pupp I, Hövel H, Hellström A, Hellström-Westas L, Löfqvist C, Larsson EM, Lazeyras F, Fellman V, Hüppi PS, Ley D.. Postnatal decrease in circulating insulin-like growth factor-I and low brain volumes in very preterm infants - Journal of Clinical Endocrinology and Metabolism, 96(4): 1129-35, April 2011
Guerquin-Kern M, Haberlin M, Pruessmann KP, Unser M. A Fast Wavelet-Based Reconstruction Method for Magnetic Resonance Imaging - IEEE Transactions on Medical Imaging, 30(9): 1649 - 1660, April 2011
Gorthi S, Duay V, Bresson X, Bach Cuadra M, Castro FJS, Pollo C, Allal A, Thiran JP. Active deformation fields: Dense deformation field estimation for atlas-based segmentation using the active contour framework - Medical Image Analysis, 15(6): 787-800, December 2011
Cabezas M, Oliver A, Llado X, Freixenet J, Bach Cuadra M. A review of atlas-based segmentation for magnetic resonance brain images - Computer Methods and Programs in Biomedicine, 104(3): e158-77, Decmber 2011
Van De Ville D, Forster-Heinlein B, Unser M, Blu T. Analytical Footprints: Compact Representation of Elementary Singularities in Wavelet Bases - IEEE Transactions on Signal Processing, 58(12): 6105 - 6118, August 2010
Unser M, Van de Ville D. Wavelet Steerability and the Higher-Order Riesz Transform - IEEE Transactions on Image Processing, 19(3): 636 - 652, December 2009
Seelamantula CS, Unser M. Performance Analysis of Reconstruction Techniques for Frequency-Domain Optical-Coherence Tomography - IEEE Transactions on Signal Processing, 58(3): 1947 - 1951, November 2009
Schaer M, Glaser B, Ottet MC, Schneider M, Bach Cuadra M, Debbané M, Thiran JP, Eliez S. Regional cortical volumes and congenital heart disease: a MRI study in 22q11.2 deletion syndrome - Journal of Neurodevelopmental Disorders, 2(4): 224-234, December 2010
Sage D, Unser M, Salmon P, Dibner C. A software solution for recording circadian oscillator features in time-lapse live cell microscopy - Cell Division, 5: 17, July 2010
Luisier F, Vonesch C, Blu T, Unser M. Fast interscale wavelet denoising of Poisson-corrupted images - Signal Processing, 90(2): 415-427, February 2010
Luisier F, Blu T, Unser M. SURE-LET for Orthonormal Wavelet-Domain Video Denoising - IEEE Transactions on Circuits and Systems for Video Technology, 20(6): 913 - 919, June 2010
Lagioia A, Van De Ville D, Debbane M, Lazeyras F, Eliez S. Adolescent resting state networks and their associations with schizotypal trait expression - Frontiers in System Neuroscience, 4: 35, August 2010
Hagmann P, Cammoun L, Gigandet X, Gerhard S, Grant PE, Wedeen V, Meuli R, Thiran JP, Honey CJ, Sporns O.. MR connectomics: Principles and challenges - Journal of Neuroscience Methods, 194(1): 34-45, December 2010
Viceic D, Campos R, Fornari E, Spierer L, Meuli R, Clarke S, Thiran JP. Local landmark-based registration for fMRI group studies of nonprimary auditory cortex - NeuroImage, 44(1): 145-53, January 2009
Van De Ville D, Kocher M. SURE-Based Non-Local Means - IEEE Signal Processing Letters, 16(11): 973 - 976, July 2009
Unser M, Sage D, Van De Ville D. Multiresolution Monogenic Signal Analysis Using the Riesz-Laplace Wavelet Transform - IEEE Transactions on Image Processing, 18(11): 2402 - 2418, November 2009
Schaer M, Glaser B, Bach Cuadra M, Debbane M, Thiran JP, Eliez S.. Congenital heart disease affects local gyrification in 22q11.2 deletion syndrome - Developmental Medicine and Child Neurology, 51(9): 746-53, September 2009
Raabe A, Van De Ville D, Leutenegger M, Szelényi A, Hattingen E, Gerlach R, Seifert V, Hauger C, Lopez A, Leitgeb R, Unser M, Martin-Williams EJ, Lasser T. Laser Doppler imaging for intraoperative human brain mapping - NeuroImage, 44(4): 1284-9, February 2009
Martin-Fernandez M, Munoz-Moreno E, Cammoun L, Thiran JP, Westin CF, Alberola-Lopez C. Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data - Medical Image Analysis, 13(1): 19-35, February 2009
Kandaswamy D, Blu T, Van de Ville D. Analytic Sensing: Noniterative Retrieval Of Point Sources From Boundary Measurements - SIAM Journal on Scientific Computing, 31(4): 3179-3194, January 2009