Publications
Mirian C, Duun-Henriksen AK, Maier A, Møller Pedersen M, Rehné Jensen L, Bashir A, Graillon T, Hrachova M, Bota D, van Essen M, Spanjol P, Kreis C, Law I, Broholm H, Poulsgaard L, Fugleholm K, Ziebell M, Munch T, Walter MA, and Mathiesen T. Somatostatin receptor-targeted radiopeptide therapy in treatment-refractory meningioma: an individual patient data meta-analysis - Journal of Nuclear Medicine, : , August 2020
Lanz B, Abaei A, Braissant O, Choi IY, Cudalbu C, Henry PG, Gruetter R, Kara F, Kantarci K, Lee P, Lutz N, Marjańska M, Mlynárik V, Rasche V, Xin L, Valette J. Magnetic resonance spectroscopy in the rodent brain: Experts’ consensus recommendations - NMR in Biomedicine, : e4325, August 2020
Antiochos P, Ge Y, Steel K, Bingham S, Abdullah S, Mikolich JR, Arai AE, Bandettini P, Patel A, Farzaneh-Far A, Heitner JF, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R, SPINS Study Investigators. Imaging of clinically unrecognized myocardial fibrosis in patients with suspected coronary artery disease - Journal of the American College of Cardiology, 76(8): 945-957, August 2020
Kreis R, Boer V, Choi IY, Cudalbu C, de Graaf RA, Gasparovic C, Heerschap A, Krššák M, Lanz B, Maudsley AA, Meyerspeer M, Near J, Öz G, Posse S, Slotboom J, Terpstra M, Tkáč I, Wilson M, Bogner W. Terminology and concepts for the characterization of in vivo MR spectroscopy methods and MR spectra: Background and experts’ consensus recommendations - NMR in Biomedicine, : , August 2020
La Rosa F, Beck ES, Abdulkadir A, Thiran JP, Reich DS, Sati P, Bach Cuadra M. Automated detection of cortical lesions in multiple sclerosis patients with 7T MRI - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : , Lima, Peru, October 2020
Cantonas LM, Mancini V, Rihs TA, Rochas V, Schneider M, Eliez S, Michel CM. Abnormal auditory processing and underlying structural changes in 22q11.2 deletion syndrome - Schizophrenia Bulletin, 47(1): 189–196, August 2020
Maitre NL, Jeanvoine A, Yoder PJ, Key AP, Slaughter JC, Carey H, Needham A, Murray MM, Heathcock H, and the BBOP group. Kinematic and somatosensory gains in infants with cerebral palsy after a multi-component upper-extremity intervention: A randomized controlled trial - Brain Topography, 33: 751–766, December 2020
Strasser A, Luksys G, Xin L, Pessiglione M, Gruetter R, Sandi C. Glutamine-to-glutamate ratio in the nucleus accumbens predicts effort-based motivated performance in humans - Neuropsychopharmacology, 45(12): 2048–2057, November 2020
Lajous H, Hilbert T, Roy CW, Tourbier S, de Dumast P, Yu T, Thiran JP, Ledoux JB, Piccini D, Hagmann P, Meuli R, Kober T, Stuber M, van Heeswijk RB, Bach Cuadra M. T2 mapping from super-resolution-reconstructed clinical fast spin echo magnetic resonance acquisitions - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, 12262: 114-124, Lima, Peru, October 2020
Denervaud S, Fornari E, Yang X-F, Hagmann P, Immordino-Yang MH, Sander D. An fMRI study of error monitoring in Montessori and traditionally-schooled children - npj Science of Learning, 5(11): , July 2020
Tovar D, Murray MM, Wallace MT. Selective enhancement of object representations through multisensory integration - The Journal of Neuroscience, 40(29): 5604-5615, July 2020
Yu T, Canales-Rodríguez EJ, Pizzolato M, Piredda G, Hilbert T, Fischi-Gomez E, Weigel M, Barakovic M, Bach Cuadra M, Granziera C, Kober T, Thiran JP. Model-lnformed machine learning for multi-component T2 relaxometry - Medical image Analysis, 69(101940): , July 2020
Ge Y, Pandya A, Steel K, Bingham S, Jerosch-Herold M, Chen YY, Mikolich R, Arai A, Bandettini P, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Hachamovitch R, Stuber M, Simonetti O, Kwong R. Cost-effectiveness analysis of stress cardiovascular magnetic resonance imaging for stable chest pain syndromes - JACC Cardiovasc Imaging, 13(7): 1505-1517, July 2020
Antiochos P, Ge Y, Steel K, Chen Y-Y, Bingham S, Abdullah S, Mikolich JR, Arai A, Bandettini P, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Murthy V, Kwong R. Evaluation of Stress Cardiac Magnetic Resonance Imaging in risk reclassification of patients with suspected coronary artery disease - JAMA Cardiology, : e202834, July 2020
Alemán Y, Najdenovska E, Roine T, Fartaria MJ, Canales-Rodríguez EJ, Rovó Z, Hagmann P, Conus P, Do KQ, Klauser P, Steullet P, Baumann PS, Bach Cuadra M. Partial‐volume modeling reveals reduced gray matter in specific thalamic nuclei early in the time course of psychosis and chronic schizophrenia - Human Brain Mapping, 41(14): 4041-4061, July 2020
Adam-Darque A, Freitas L, Grouiller F, Sauser J, Lazeyras F, Van De Ville D, Pollien P, Garcia-Rodenas CL, Bergonzelli G, Hüppi PS, Ha-Vinh Leuchter R. Shedding light on excessive crying in babies - Pediatric Research, : , July 2020
Carboni M, De Stefano P, Vorderwülbecke BJ, Tourbier S, Mullier E, Rubega M, Momjian S, Schaller K, Hagmann P, Seeck M, Michel CM, van Mierlo P, Vulliemoz S. Abnormal directed connectivity of resting state networks in focal epilepsy - NeuroImage: Clinical, 27: 102336, July, 2020
Retsa C, Matusz PJ, Schnupp JW, Murray MM. Selective attention to sound features mediates cross-modal activation of visual cortices - Neuropsychologia, 144(107498): , July 2020
Franceschiello B, Di Sopra L, Minier A, Ionta S, Zeugin D, Notter MP, Bastiaansen JAM, Jorge J, Yerly J, Stuber M, Murray MM. 3-dimensional magnetic resonance imaging of the freely moving human eye - Progress in Neurobiology, 194(101885): , July 2020
Hayoz R, Vietti-Violi N, Duran R, Knebel JF, Ledoux JB, Dromain C. The combination of hepatobiliary phase with Gd-EOB-DTPA and DWI is highly accurate for the detection and characterization of liver metastases from neuroendocrine tumor - European Radiology, 30(12): 6593-6602, June 2020
Juchem C, Cudalbu C, de Graaf RA, Gruetter R, Henning A, Hetherington HP, Boer VO. B0 shimming for in vivo magnetic resonance spectroscopy: Experts’ consensus recommendations - NMR in Biomedicine, (e4350): , June 2020
Gudmundsson L, Vohryzek J, Fornari E, Clarke S, Hagmann P, Crottaz-Herbette S. A brief exposure to rightward prismatic adaptation changes resting-state network characteristics of the ventral attentional system - PLOS One, 15: e0234382, June 2020
Bozorgtabar B, Mahapatra D, Zlobec I, Rau T, Thiran JP. Computational pathology - Frontiers in Medicine, 7: , June 2020
Ros T, Enriquez-Geppert S, Zotev V, Scharnowski F, Nicholson A, Drechsler R. Consensus on the reporting and experimental design of clinical and cognitive-behavioural neurofeedback studies (CRED-nf checklist) - Brain, 143(6): 1674–1685, June 2020
Adam-Darque A, Pittet MP, Grouiller F, Rihs TA, Leuchter RH, Lazeyras F, Michel CM, Hüppi PS. Neural correlates of voice perception in newborns and the influence of preterm birth - Cerebral Cortex, 9(144): , June 2020
Tivadar RI, Gaglianese A, Murray MM. Auditory enhancement of illusory contour perception - Multisensory Research, 34(1): 1-15, June 2020
Marcadent S, Hofmeister J, Preti MG, Martin S, Van De Ville D, Montet X. Generative adversarial networks improve the reproducibility and discriminative power of radiomics features - Radiology: Artificial Intelligence, 2(3): , May 2020
Piccini D, Demesmaeker R, Heerfordt J, Yerly J, Di Sopra L, Masci PG, Schwitter J, Van De Ville D, Richiardi J, Kober T, Stuber M. Deep learning to automate reference-free image quality assessment of whole-heart MR images - Radiology: Artificial Intelligence, 2(3): e190123, May 2020
Bach Cuadra M, Favre J, Omoumi P. Quantification in musculoskeletal imaging using computational analysis and machine learning: Segmentation and radiomics - Seminars in Musculoskeletal Radiology, 24(1): 50-64, February 2020
Siffredi V, Preti MG, Kebets V, Obertino S, Leventer RJ, McIlroy A, Wood A, Anderson V, Spencer-Smith M, Van De Ville D. Structural neuroplastic responses preserve functional connectivity and neurobehavioural outcomes in children born without corpus callosum - Cerebral Cortex, 31: 1227-1239, May 2020
Pugin D, Hofmeister J, Gasche Y, Vulliemoz S, Lovblad KO, Van De Ville D, Haller S. Resting-state brain activity for early prediction outcome in post-anoxic comatose patients with indeterminate clinical prognosis - American Journal of Neuroradiology, 41: 1022-1030, May 2020
Maggi P, Fartaria M, Jorge J, La Rosa F, Absinta M, Sati P, Meuli R, Du Pasquier R, Reich D, Bach Cuadra M, Granziera C, Richiardi J, Kober T. CVSnet: A machine learning approach for automated central vein sign assessment in multiple sclerosis - NMR in Biomedicine, : , March 2020
Dong J, Jelescu I, Ades-Aron B, Novikov D, Friedman K, Babb J, Osorio R, Galvin J, Shepherd T, Fieremans E. Diffusion MRI biomarkers of white matter microstructure vary nonmonotonically with increasing cerebral amyloid deposition - Neurobiology of Aging, 89: 118-128, May 2020
Rackayova V, Braissant O, Rougemont AL, Cudalbu C, McLin VA. Longitudinal osmotic and neurometabolic changes in young rats with chronic cholestatic liver disease - Scientific Reports, 10(7536): , May 2020
del Aguila Pla P, Pellaco L, Dwivedi S, Händel P, Jaldén J. Clock synchronization over networks using sawtooth models - IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'20), : 5945-5949, Barcelona, Spain, May 2020
ZanchiF, Richard R, Hussami M, Monier A, Knebel JF, Omoumi P. MRI of non-specific low back pain and/or lumbar radiculopathy: do we need T1 when using a sagittal T2-weighted Dixon sequence? - European Radiology, 30: 2583-2593, February 2020
Anselmi F, Murray MM, Franceschiello B. A computational model for grid maps in neural populations - Journal of Computational Neuroscience, 48: 149–159, March 2020
Denervaud S, Gentaz E, Matusz PJ, Murray MM. Multisensory gains in simple detection predict global cognition in schoolchildren - Scientific Reports, 10(1394): , February 2020
De Zanet SI, Ciller C, Rudolph T, Maeder P, Munier F, Balmer A, Bach Cuadra M, Kowal JH. Landmark Detection for Fusion of Fundus and MRI Towards a Patient-Specific Multi-Modal Eye Model - IEEE Transactions on Biomedical Engineering, 62(2): 532-40, February 2015
Daducci A, Dal Palu A, Lemkaddem A, Thiran JP. COMMIT: Convex Optimization Modeling for Microstructure Informed Tractography - IEEE Transactions on Medical Imaging, 34(1): 246-57, January 2015
Daducci A, Canales-Rodríguez EJ, Zhang H, Dyrby TB, Alexander DC, Thiran J. Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data - NeuroImage, 105: 32-44, January 2015
Ciller C, De Zanet S, Rüegsegger MB, Pica A, Sznitman R, Thiran JP, Maeder P, Munier FL, Kowal JH, Bach Cuadra M. Automatic Segmentation of the Eye in 3D Magnetic Resonance Imaging: A Novel Statistical Shape Model for Treatment Planning of Retinoblastoma - International Journal of Radiation Oncology, Biology, Physics, 92(4): 794-802, July 2015
Bonnier G, Roche A, Romascano D, Simioni S, Meskaldji DE, Rotzinger D, Lin YC, Menegaz G, Schluep M, Du Pasquier R, Sumpf TJ, Frahm J, Thiran JP, Krueger G, Granziera C. Multicontrast MRI Quantification of Focal Inflammation and Degeneration in Multiple Sclerosis - BioMed Research International, : 569123, July 2015
Auría A, Daducci A, Thiran JP, Wiaux Y. Structured sparsity for spatially coherent fibre orientation estimation in diffusion MRI - NeuroImage, 115: 245-55, July 2015
Behjat H, Leonardi N, Sornmo L, Van De Ville D. Anatomically-adapted graph wavelets for improved group-level fMRI activation mapping - NeuroImage, 123: 185-99, December 2015
Tourbier S, Bresson X, Hagmann P, Thiran J-P, Meuli R, Bach Cuadra M. Efficient Total Variation Algorithm for Fetal Brain MRI Reconstruction - NeuroImage, 118: 584-97, September 2015
Rueda S, Fathima S, Knight CL, Yaqub M, Papageorghiou AT, Rahmatullah B, Foi A, Maggioni M, Pepe A, Tohka J, Stebbing R, Mcmanigle J, Ciurte A, Bresson, X, Bach Cuadra M, Sun C, Ponomarev G, Gelfand M, Kazanov M, Wang C, Chen H, Peng C, Hung C, Noble A. Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation Methods for Biometric Measurements: A Grand Challenge - IEEE Transactions on Medical Imaging, 33(4): 797 - 813, August 2013
Leonardi N, Shirer WR, Greicius MD, Van De Ville D. Disentangling dynamic networks: Separated and joint expressions of functional connectivity patterns in time - Human Brain Mapping, 35(12): 5984-95, December 2014
Lemkaddem A, Skiöldebrand D, Dal Palú A, Thiran JP, Daducci A. Global tractography with embedded anatomical priors for quantitative connectivity analysis - Frontiers in Neuroscience, 5: 232, November 2014
Lemkaddem A, Daducci A, Kunz N, Lazeyras F, Seeck M, Thiran JP, Vulliemoz S. Connectivity and tissue microstructural alterations in right and left temporal lobe epilepsy revealed by diffusion spectrum imaging - NeuroImage: Clinical, 5: 349-358, December 2014
Foncubierta-Rodríguez A, Müller H, Depeursinge A. Retrieval of high-dimensional visual data: current state, trends and challenges ahead - Multimedia Tools and Applications, 69: 539–567, January 2013
Esteban O, Wollny G, Gorthi S, Ledesma-Carbayo MJ, Thiran JP, Santos A, Bach Cuadra M. MBIS: Multivariate Bayesian Image Segmentation tool - Computer Methods and Programs in Biomedicine, 115(2): 76-94, 2014
Emmert K, Breimhorst M, Bauermann T, Birklein F, Van De Ville D, Haller S. Comparison of anterior cingulate versus insular cortex as targets for real-time fMRI regulation during pain stimulation - Frontiers in Behavioral Neuroscience, 8: 350, October 2014
Depeursinge A, Foncubierta-Rodriguez A, Van De Ville D, Muller H. Three-dimensional solid texture analysis in biomedical imaging: review and opportunities - Medical Image Analysis, 18(1): 176-96, January 2014
Depeursinge A, Foncubierta-Rodriguez A, Van de Ville D, Muller H. Rotation-Covariant Texture Learning Using Steerable Riesz Wavelets - IEEE Transactions on Image Processing, 23(2): 898 - 908, December 2013