MRI
Pierzchala K, Simicic D, Sienkiewicz A, D Sessa D, Mitrea S, Braissant O, McLin VA, Gruetter R, Cudalbu C. Central nervous system and systemic oxidative stress interplay with inflammation in a bile duct ligation rat model of type C hepatic encephalopathy. - Free Radical Biology and Medicine, 178(2022): 295-307, January 2022
Yacoub B, Stroud RE, Piccini D, Schoepf UJ, Heerfordt J, Yerly J, Di Sopra L, Rollins JD, Turner DA, Emrich T, Xiong F, Suranyi P, Varga‑Szemes A. Measurement accuracy of prototype non‑contrast, compressed sensing‑based, respiratory motion‑resolved whole heart cardiovascular magnetic resonance angiography for the assessment of thoracic aortic dilatation: comparison with computed tomography angiography - Journal of Cardiovascular Magnetic Resonance, 23(7): , December 2021
Bustin A, Sridi S, Gravinay P, Legghe B, Gosse P, Ouattara A, Roz´e H, Coste P, Gerbaud E, Desclaux A, Boyer A, Prevel R, Gruson D, Bonnet F, Issa N, Montaudon M, Laurent F, Stuber M, Camou F, Cochet H. High-resolution Free-breathing late gadolinium enhancement Cardiovascular magnetic resonance to diagnose myocardial injuries following COVID-19 infection - European Journal of Radiology, 144: 109960, November 2021
Bonanno G, Weiss RG, Piccini D, Yerly J, Soleimani S, Pan L, Bi X, Hays AG, Stuber M, Schär M. Volumetric coronary endothelial function assessment: a feasibility study exploiting stack‐of‐stars 3D cine MRI and image‐based respiratory self‐gating - NMR in Biomedicine, 34(11): e4589, November 2021
Bustin A, Toupin S, Sridi S, Yerly J, Bernus O, Labrousse L, Quesson B, Rogier J, Haïssaguerre M, van Heeswijk R, Jaïs P, Cochet H, Stuber M. Endogenous assessment of myocardial injury with single-shot model-based non-rigid motion-corrected T1 rho mapping - Journal of Cardiovascular Magnetic Resonance, 23(119): , October 2021
Falcão MBL, Di Sopra L, Ma L, Bacher M, Yerly J, Speier P, Rutz T, Prša M, Markl M, Stuber M, Roy CW. Pilot tone navigation for respiratory and cardiac motion-resolved free-running 5D flow MRI - Magnetic Resonance in Medicine, 87(2): , October 2021
Kebiri H, Lajous H, Yasser Aleman-Gomez Y, Girard G, Canales Rodriguez E, Tourbier S, Pizzolato M, Ledoux JB, Fornari E, Jakab A, Bach Cuadra M. Quantitative evaluation of enhanced multi-plane clinical fetal diffusion MRI with a crossing-fiber phantom - 12th International Workshop, CDMRI 2021, 13006: 12-22, Strasbourg, France, October 2021
Klauser A, Klauser P, Grouiller F, Courvoisier S, Lazeyras F. Whole-brain high-resolution metabolite mapping with 3D compressed-sensing SENSE low-rank 1H FID-MRSI - NMR in Biomedicine, : e4615, October 2021
Dorniak K, Di Sopra L, Sabisz A, Glinska A, Roy CW, Gorczewski K, Piccini D, Yerly J, Jankowska H, Fijałkowska J, Szurowska E, Stuber M, van Heeswijk RB. Respiratory motion-registered isotropic whole-Heart T2 mapping in patients with acute non-ischemic myocardial injury - Frontiers in Cardiovascular Medicine, 8(712383): , September 2021
Kathe C, Michoud F, Schönle P, Rowald A, Brun N, Ravier J, Furfaro I, Paggi V, Kim K, Soloukey S, Asboth L, Hutson TH, Jelescu I, Philippides A, Alwahab N, Gandar J, Huber D, De Zeeuw CI, Barraud Q, Huang Q, Lacour SP, Courtine G. Wireless closed-loop optogenetics across the entire dorsoventral spinal cord in mice - Nature Biotechnology, : 1087-0156, September 2021
Lajous H, Hilbert T, Roy CW, Tourbier S, de Dumast P, Alemán-Gómez Y, Yu T, Kebiri H, Ledoux JB, Hagmann P, Meuli R, Dunet V, Koob M, Stuber M, Kober T, Bach Cuadra M. Simulated Half-Fourier Acquisitions Single-shot Turbo spin Echo (HASTE) of the fetal brain: application to super-resolution reconstruction - Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Perinatal Imaging, Placental and Preterm Image Analysis. UNSURE 2021, PIPPI 2021, 12959: 157-167, Strasbourg, France, September 2021
Flatt E, McLin VA, Olivier Braissant O, Pierzchala K, Mastromarino P, Mitrea SO, Sessa D, Gruetter R, Cudalbu C. Probiotics combined with rifaximin influence the neurometabolic changes in a rat model of type C HE - Scientific Reports, 11(1): 17988, September 2021
Da Costa S, Clément J, Gruetter R, Ipek O. Evaluation of the whole auditory pathway using high-resolution and functional MRI at 7T parallel-transmit - PLoS One, 16: e0254378, September 2021
Regnaud A, Boto J, Klauser A, Lövblad KO, Vargas MI, Lazeyras F. Metabolic changes in the cingulate gyrus, precuneus, and white matter in anorexia nervosa using multivoxel MR spectroscopy - Journal of Neuroimaging, : 1-12, August 2021
Askin Incebacak NC, Sui Y, Gui Levy L, Merlini L, Sa de Almeida J, Courvoisier S, Wallace TE, Klauser A, Afacan O, Warfield SK, Hüppi P, Lazeyras F. Super-resolution reconstruction of T2-weighted thick-slice neonatal brain MRI scans - Journal of Neuroimaging, 1: 12, August 2021
Klauser A, Strassera B, Thapaa B, Lazeyras F, Andronesi O. Achieving high-resolution 1H-MRSI of the human brain with compressed-sensing and low-rank reconstruction at 7 Tesla - Journal of Magnetic Resonance, 331(2021): 107048, August 2021
Cudalbu C, Bady P, Lai M, Xin L, Gusyatiner O, Hamou MF, Lepore M, Brouland JP, Daniel RT, Hottinger AF, Hegi ME. Metabolic and transcriptomic profiles of glioblastoma invasion revealed by comparisons between patients and corresponding orthotopic xenografts in mice - Acta Neuropathologica Communications, 9: 133, August 2021
Heerfordt J, Whitehead KK, Bastiaansen JAM, Di Sopra L, Roy CW, Yerly J, Milani B, Fogel MA, Stuber M, Piccini D. Similarity-driven multi-dimensional binning algorithm (SIMBA) for free-running motion-suppressed whole-heart MRA - Magnetic Resonance in Medicine, 86(1): 213–229, July 2021
Ma L, Yerly J, Di Sopra L, Piccini D, Lee J, DiCarlo A, Passman R, Greenland P, Kim D, Stuber M, Markl M. Using 5D flow MRI to decode the effects of rhythm on left atrial 3D flow dynamics in patients with atrial fibrillation - Magnetic Resonance in Medicine, 85(6): 3125-3139, June 2021
Flatt E, Lanz B, Pilloud Y, Capozzi A, Hauge Lerche M, Gruetter R, Mishkovsky M. Measuring Glycolytic Activity with Hyperpolarized [2H7, U-13C6] D-Glucose in the Naive Mouse Brain under Different Anesthetic Conditions - Metabolites, 11(7): 413, June 2021
Simicic D, Rackayova V, Xin L, Tkáč I, Borbath T, Starcuk Z, Starcukova J, Lanz B, Cudalbu C. In vivo macromolecule signals in rat brain 1H-MR spectra at 9.4T: Parametrization, spline baseline estimation, and T2 relaxation times - Magnetic Resonance in Medicine, 00: 1-18, June 2021
Wenz D, Gruetter R. Dipole-fed rectangular dielectric resonator antennas for magnetic resonance imaging at 7 T: The impact of quasi-transverse electric modes on transmit field distribution - Frontiers in Physics, 9: 675509, June 2021
Dwir D, Cabungcal JH, Xin L, Giangreco B, Parietti E, Cleusix M, Jenni R, Klauser P, Conus P, Cuénod M, Steullet P, Do KQ. Timely N-acetyl-cysteine and environmental enrichment rescue oxidative stress-induced parvalbumin interneuron impairments via MMP9/RAGE pathway: A translational approach for early intervention in psychosis - Schizophrenia Bulletin, 47(6): 1782-1794, June 2021
Yoo J, Jin KH, Gupta H, Yerly J, Stuber M, Unser M. Time-dependent deep image prior for dynamic MRI - IEEE Transactions on Medical Imaging, 40(12): 3337 - 3348, May 2021
Ribaldi F, Chicherio C, Altomare D, Martins M, Tomczyk S, Jelescu I, Maturana E, Scheffler M, Haller S, Lövblad KO, Michela Pievani M, Garibotto V, Kliegel M, Frisoni GB. Brain connectivity and metacognition in persons with subjective cognitive decline (COSCODE): rationale and study design - Alzheimer's Research & Therapy, 13: 105, May 2021
Lajous H, Hilbert T, Roy CW, Tourbier S, de Dumast P, Alemán-Gómez Y, Yu T, Hagmann P, Koob M, Dunet V, Kober T, Stuber M, Bach Cuadra M. A magnetic resonance imaging simulation framework of the developing fetal brain - Proceedings of the 29th ISMRM & SMRT Annual Meeting, : , Online, May 2021
Simicic D, Mosso J, Lê TP, van Heeswijk RB, Jelescu I, Cudalbu C. The impact of Marchencko-Pasteur principal component analysis denoising on high-resolutionMR spectroscopic imaging in the rat brain at 9.4T - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Mosso J, Valette J, Pierzchala K, Simicic D, Jelescu I, Cudalbu C. Diffusion-weighted magnetic resonance spectroscopy in the cerebellum of a rat model of hepatic encephalopathy at 14.1T - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Simicic D, Pierzchala K, Braissant O, Mitrea SO, Sessa D, McLin V, Cudalbu C. Protective role of Creatine in chronic hepatic encephalopathy developing brain: in vivolongitudinal H and P-MRS study - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Jelescu I, Novikov DS. What can a rat tell about physics beyond Standard Model: Exchange or structural disorder? - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Pievani M, Jelescu I, Jorge J, Reynaud O, Ribaldi F, Garibotto V, Frisoni GB, Jovicich J. In vivo mapping of human locus coeruleus functional connectivity at 7T: a feasibility study - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Olszowy W, Jelescu I. Beyond BOLD: in search of genuine diffusion fMRI contrast in human brain - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Wachsmuth L, Mensen A, Barca C, Wiart M, Tristão-Pereira C, Busato A, Waicyies S, Himmelreich U, Millward JM, Reimann HM, Jelescu I, Marzola P, Pradier B, Viola A, Faber C. Contribution of preclinical MRI to responsible animal research: living up to the 3R principle - Magnetic Resonance Materials in Physics, Biology and Medicine, 34: 469–474, May 2021
Klauser A, Strasser B, Bogner W, Hingerl L, Schirda C, Thapa B, Cahill D, Batchelor T, Lazeyras F, Andronesi O. ECcentric Circle ENcoding TRajectorIes for Compressed-sensing (ECCENTRIC): A fully random non-Cartesian sparse Fourier domain sampling for MRSI at 7 Tesla - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Klauser A, Courvoisier S, Kocher M, Lazeyras F. Fast Adiabatic Spin Echo MRSI Sequence for Whole Brain 5mm-isotropic metabolic imaging - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Bustin A, Sridi S, Toupin S, Yerly J, Piccini D, van Heeswijk RB, Jaïs P, Cochet H, Stuber M. Single-shot model-based non-rigid motion-corrected T1 rho mapping for endogenous assessment of myocardial injury - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Mackowiak ALC, Roy CW, Yerly J, Di Sopra L, B. L. Falcaõ M, Bacher M, Speier P, Piccini D, Stuber M, Bastiaansen JAM. Whole-heart motion-resolved multi-peak fat-fraction mapping using Free-Running 3D radial multi-echo GRE and pilot tone - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Baginha da Lança Falcão M, Rossi GMC, Ma L, Heerfordt J, Piccini D, Yerly J, Prša M, Rutz T, Tenisch E, Markl M, Stuber M, Roy CW. Correcting vs resolving respiratory motion in accelerated free-running whole-heart radial flow MRI using focused navigation (fNAV) - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Rossi GMC, Masala N, Bastiaansen JAM, Bustin A, Yerly J, Heerfordt J, Piccini D, Stuber M, Roy CW. Focused navigation (fNAV) for cardiac and respiratory motion-compensated free-running 3D whole-heart coronary MRA - ISMRM & SMRT Annual Meeting, : , Online, May 2021
de Skowronski A, Palombo M, Novikov DS, Jelescu I. Parameter estimation for the GRAMM I (GRAy Matter Microstructure Imaging) model of two exchanging compartments in the rat cortex in vivo - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Diao Y, Gruetter R, Jelescu I. Spatio-temporal alterations in resting-state co-activation patterns in a rat model of sporadic Alzheimer’s disease - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Roy CW, Alamo L, Tenisch E, Heerfordt J, Prsa M, Bach Cuadra M, Piccini D, Yerly J, Stuber M. Motion compensated Free-Running 3D fetal magnetic resonance imaging: initial feasibility - Proceedings of the 29th ISMRM & SMRT Annual Meeting, : , Online, May 2021
Wenz D. Toward enhanced transmit performance of rectangular dielectric resonator antenna arrays for 7-T MRI using loop/dipole coupling scheme - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Dardano T, Gruetter R, Wenz D. Combining loops and dipoles to increase the signal-to-noise ratio in human brain MRI at 7T: how to shorten a dipole antenna? - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Wenz D, Gruetter R. The impact of quasi-transverse electric modes excited by dipole antennas on transmit field in in vivo ultrahigh field MRI - ISMRM & SMRT Annual Meeting, : , Online, May 2021
Wirsich J, Jorge J, Iannotti GR, Shamshiri EA, Grouiller F, Abreu R, Lazeyras F, Giraud AL, Gruetter R, Sadaghiani S, Vulliémoz S. The relationship between EEG and fMRI connectomes is reproducible across simultaneous EEG-fMRI studies from 1.5T to 7T - NeuroImage, 231: 117864, May 2021
Do KQ, Cabungcal JH, Cleusix M, Dwir D, Fournier M, Griffa A, Gruetter R, Hagmann P, Jenni R, Klauser P, Monin A, Mullier E, Steullet P, Xin L, Cuenod M, Conus P. Redox dysregulation, myelination deficit and dysconnectivity in schizophrenia: a translational study in first episode patients and experimental models - Biological Psychiatry, 89(9): S56, May 2021
DeMorrow S, Cudalbu C, Davies N, Jayakumar AR, Rose C. 2021 ISHEN guidelines on animal models of hepatic encephalopathy - Liver International, 41: 1474-1488, April 2021
Gonzalez Melo M, Remacle N, Cudré-Cung HP, Roux C, Poms M, Cudalbu C, Barroso M, Waldemar Gersting S, Feichtinger RG, Mayr JA, Costanzo M, Caterino M, Ruoppolo M, Rüfenacht V, Häberle J, Braissant O, Ballhausen D. The first knock-in rat model for glutaric aciduria type I allows further insights into pathophysiology in brain and periphery - Molecular Genetics and Metabolism, 133(2021): 157-181, April 2021
Diao Y, Yin T, Gruetter R, Jelescu I. PIRACY: An optimized pipeline for functional connectivity analysis in the rat brain - Frontiers in Neuroscience, 15(602170): , March 2021
Rotzinger DC, Si-Mohamed SA, Yerly J, Boccalini S, Becce F, Boussel L, Meuli RA, Qanadli SD, Douek PC. Reduced-iodine-dose dual-energy coronary CT angiography: qualitative and quantitative comparison between virtual monochromatic and polychromatic CT images - European Radiology, : , March 2021
Williams G, Thyagaraj S, Fu A, Oshinski J, Giese D, Bunck AC, Fornari E, Santini F, Luciano M, Loth F, Martin BA. In vitro evaluation of cerebrospinal fluid velocity measurement in type I Chiari malformation: repeatability, reproducibility, and agreement using 2D phase contrast and 4D flow MRI - Fluids and Barriers of the CNS, 18(12): , March 2021
Mishkovsky M, Gusyatiner O, Lanz B, Cudalbu C, Vassallo I, Hamou M-F, Bloch J, Comment A, Gruetter R, Hegi ME. Hyperpolarized C-13-glucose magnetic resonance highlights reduced aerobic glycolysis in vivo in infiltrative glioblastoma - Scientific Reports, 11(1): 5771, March 2021
Squair JW, Gautier M, Mahe L, Soriano JE, Rowald A, Bichat A, Cho N, Anderson MA, James ND, Gandar J, Incognito AV, Schiavone G, Sarafis ZK, Laskaratos A, Bartholdi K, Demesmaeker R, Komi S, Moerman C, Vaseghi B, Scott B, Rosentreter R, Kathe C, Ravier J, McCracken L, Kang X, Vachicouras N , Falleger F, Jelescu I, YunLong C, Li Q, Buschman R, Buse N, Denison T, Dukelow S, Charbonneau R, Rigby I, Boyd S, Millar P, Moraud EM, Capogrosso M, Wagner F, Barraud Q, Bezard E, Lacour S, Bloch J, Phillips A, Courtine G. Neuroprosthetic baroreflex controls haemodynamics after spinal cord injury - Nature, 590: 308–314, January 2021
Rackayová V, Flatt E, Braissant O, Grosse J, Capobianco D, Mastromarino P, McMillin M, DeMorrow S, McLin VA, Cudalbu C. Probiotics improve the neurometabolic profile of rats with chronic cholestatic liver disease - Scientific Reports, 11: , January 2021