MRI
Caballero-Gaudes C, Van de Ville D, Grouiller F, Thornton R, Lemieux L, Seeck M, Lazeyras F, Vulliemoz S.. Mapping interictal epileptic discharges using mutual information between concurrent EEG and fMRI - NeuroImage, 68: 248-62, March 2013
Vulliemoz S, Lemieux L, Daunizeau J, Michel CM, Duncan JS. The combination of EEG source imaging and EEG-correlated functional MRI to map epileptic networks - Epilepsia, 51(4): 491-505, April 2010
Britz J, Van De Ville D, Michel CM. BOLD correlates of EEG topography reveal rapid resting-state network dynamics - NeuroImage, 52(4): 1162-70, February 2010
Martuzzi R, Murray MM, Michel CM, Thiran JP, Maeder PP, Clarke S, Meuli RA. Multisensory interactions within human primary cortices revealed by BOLD dynamics - Cerebral Cortex, 17(7): 1672-9, July 2007
Dong J, Jelescu I, Ades-Aron B , Novikov D, Friedman K, Babb J, Osorio R, Galvin J, Shepherd T , Fieremans E. Diffusion MRI biomarkers of white matter microstructure vary nonmonotonically with increasing cerebral amyloid deposition - Neurobiology of Aging, 89: 118-128, May 2020
Barakovic M, Leuze C, Crow A, Tian Q, Daducci A, Thiran JP, Deisseroth K, McNab J. Comparing Fiber Orientation Estimates from CLARITY and Diffusion MRI in Macaque Visual Cortex - ISMRM 27th Annual Meeting, : , Montréal, Canada, May 2019
Canales-Rodríguez EJ, Haitz Legarreta J, Pizzolato M, Rensonnet G, Girard G, Patino J, Barakovic M, Romascano D, Alemán-Gómez Y, Radua J, Pomarol-Clotet E, Salvador R, Thiran JP, Daducci A. Sparse wars: A survey and comparative study of spherical deconvolution algorithms for diffusion MRI - NeuroImage, 184: 140-160, January 2019
Rensonnet G, Scherrer B, Girard G, Jankovski A, Warfield SK, Macq B, Thiran JP, Taquet M. Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations - NeuroImage, 184: 964-980, January 2019
Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Patino JR, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez E, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches - NeuroImage, 185: 1-11, January 2019
Lei H, Dirren E, Poitry-Yamate C, Schneider BL, Gruetter R, Aebischer P. Evolution of the neurochemical profiles in the G93A-SOD1 mouse model of amyotrophic lateral sclerosis - Journal of Cerebral Blood Flow and Metabolism, 39(7): 1283-1298, July 2019
Girault FM, Sonnay S, Gruetter R, Duarte JMN. Alterations of Brain Energy Metabolism in Type 2 Diabetic Goto-Kakizaki Rats Measured In Vivo by 13C Magnetic Resonance Spectroscopy - Neurotoxicity Research, 36(2): 268-278, August 2019
Notter MP, Gale D, Herholz P, Markello R, Notter-Bielser ML, Whitaker K. A Python package to generate coordinate tables, region labels, and informative figures from statistical MRI images - Journal of Open Source Software, 4(34): 1257, February 2019
Nguyen HG, Pica A, Hrbacek J, Weber DC, La Rosa F, Schalenbourg A, Sznitman R, Bach Cuadra M. A novel segmentation framework for uveal melanoma in magnetic resonance imaging based on class activation maps - Proceedings of The 2nd International Conference on Medical Imaging with Deep Learning, : , 2019
Deprez M, Price A, Christiaens D, Estrin Georgia L, Cordero-Grande L, Hutter J, Daducci A, Tournier JD, Rutherford M, Counsell SJ, Bach Cuadra M, Hajnal JV. Higher order spherical harmonics reconstruction of fetal diffusion MRI with intensity correction - IEEE Transactions on Medical Imaging, : 1-1, September 2019
Berchtold L, Friedli I, Crowe L, Martinez C, Moll S, Hadaya K, de Perrot T, Combescure C, Martin PY, Vallée JP, de Seigneux S. Validation of the corticomedullary difference in magnetic resonance imaging-derived apparent diffusion coefficient for kidney fibrosis detection: a cross-sectional study - Nephrology Dialysis Transplantation, : , January 2019
Guillemin PC, Gui L, Lorton O, Zilli T, Crowe LA, Desgranges S, Montet X, Terraz S, Miralbell R, Salomir R, Boudabbous S. Mild hyperthermia by MR-guided focused ultrasound in an ex vivo model of osteolytic bone tumour: optimization of the spatio-temporal control of the delivered temperature - Journal of Translational Medicine, 17(1): 350, October 2019
Lorton O, Guillemin PC, Mori N, Crowe LA, Boudabbous S, Terraz S, Becker CD, Cattin P, Salomir R, Gui L. Self-Scanned HIFU Ablation of Moving Tissue Using Real-Time Hybrid US-MR Imaging - IEEE Transactions on Biomedical Engineering, 66(8): 2182-2191, August 2019
Kwong R, Ge Y, Steel K, Bingham S, Abdullah S, Fujikura K, Wang W, Pandya A, Chen YY, Mikolich JR, Boland S, Arai AE, Bandettini WP, Shanbhag SM, Patel AR, Narang A, Farzaneh-Far A, Romer B, Heitner JF, Ho JY, Singh J, Shenoy C, Hughes A, Leung SW, Marji M, Gonzalez JA, Mehta S, Shah DJ, Debs D, Raman SV, Guha A, Ferrari VA, Schulz-Menger J, Hachamovitch R, Stuber M, Simonetti OP. Cardiac Magnetic Resonance Stress Perfusion Imaging for Evaluation of Patients With Chest Pain - Journal of the American College of Cardiology, 74(14): 1741-1755, October 2019
Wilson M, Andronesi O, Barker P, Bartha R, Bizzi A, Bolan PJ, Brindle K, Choi IY, Cudalbu C, Dydak U, Emir U, Gonzalez R, Gruber S, Gruetter R, Gupta RK, Heerschap A, Henning A, Hetherington HP, Huppi P, Hurd R, Kantarci K, Kauppinen R, Klomp D, Kreis R, Kruiskamp MJ, Leach MO, Lin AP, Luijten PR, Marjańska M, Maudsley AA, Meyerhoff DJ, Mountford CE, Mullins PG, Murdoch JB, Nelson SJ, Noeske R, Öz G, Pan JW, Peet AC, Poptani H, Posse S, Ratai E, Salibi N, Scheenen T, Smith I, Soher B, Tkáč I, Vigneron D, Howe F. Methodological consensus on clinical proton MRS of the brain: Review and recommendations - Magnetic Resonance in Medicine, 82: 527-550, August 2019
Dubois J, Lefèvre J, Angleys H, Leroy F, Fischer C, Lebenberg J, Dehaene-Lambertz G, Borradori-Tolsa C, Lazeyras F, Hertz-Pannier L, Mangin JF, Hüppi PS, Germanaud D. The dynamics of cortical folding waves and prematurity-related deviations revealed by spatial and spectral analysis of gyrification - NeuroImage, 185: 934-946, January 2019
Lordier L, Loukas S, Grouiller F, Vollenweider A, Vasung L, Meskaldij D, Lejeune F, Pittet M, Borradori-Tolsa C, Lazeyras F, Grandjean D, Van De Ville D, Hüppi P. Music processing in preterm and full-term newborns: A psychophysiological interaction (PPI) approach in neonatal fMRI - NeuroImage, 185: 857-864, January 2019
Gui L, Loukas S, Lazeyras F, Hüppi P, Meskaldji D, Borradori Tolsa C. Longitudinal study of neonatal brain tissue volumes in preterm infants and their ability to predict neurodevelopmental outcome - NeuroImage, 185: 728-741, January 2019
Klauser A, Courvoisier S, Kasten J, Kocher M, Guerquin-Kern M, Van De Ville D, Lazeyras F. Fast high-resolution brain metabolite mapping on a clinical 3T MRI by accelerated 1 H-FID-MRSI and low-rank constrained reconstruction - Magnetic Resonance in Medicine, 81: 2841-2857, May 2019
Ptak R, Lazeyras F. Functional connectivity and the failure to retrieve meaning from shape in visual object agnosia - Brain and Cognition, 131: 94-101, April 2019
Moeckli B, Sun P, Lazeyras F, Morel P, Moll S, Pascual M, Bühler L. Evaluation of donor kidneys prior to transplantation: an update of current and emerging methods - Transplant International, 32: 459-469, May 2019
Lordier L, Meskaldji D, Grouiller F, Pittet M, Vollenweider A, Vasung L, Borradori-Tolsa C, Lazeyras F, Grandjean D, Van De Ville D, Hüppi P. Music in premature infants enhances high-level cognitive brain networks - Proceedings of the National Academy of Sciences, 116: 12103-12108, June 2019
Boto J, Askin N, Regnaud A, Kober T, Gkinis G, Lazeyras F, Lövblad K, Vargas M. Cerebral Gray and White Matter Involvement in Anorexia Nervosa Evaluated by T1, T2, and T2* Mapping - Journal of Neuroimaging, 29: 598-604, September 2019
Sa de Almeida J, Lordier L, Zollinger B, Kunz N, Bastiani M, Gui L, Adam-Darque A, Borradori-Tolsa C, Lazeyras F, Hüppi P. Music enhances structural maturation of emotional processing neural pathways in very preterm infants - NeuroImage, 207: 116391, February 2020
Longchamp A, Meier R, Colucci N, Balaphas A, Orci L, Nastasi A, Longchamp G, Moll S, Klauser A, Pascual M, Lazeyras F, Corpataux J, Bühler L. Impact of an intra-abdominal cooling device during open kidney transplantation in pigs - Swiss Medical Weekly, 149: w20143, December 2019
Crottaz-Herbette S, Tissieres I, Fornari E, Rapin P, Clarke S. Remodelling the attentional system after left hemispheric stroke: Effect of leftward prismatic adaptation - Cortex, 115: 43-55, June 2019
Yerly J, Becce F, van Heeswijk R, Verdun F, Gubian D, Meuli R, Stuber M. In vitro optimization and comparison of CT angiography versus radial cardiovascular magnetic resonance for the quantification of cross-sectional areas and coronary endothelial function - Journal of Cardiovascular Magnetic Resonance, 21: 11, February 2019
Delacoste J, Feliciano H, Yerly J, Dunet V, Beigelman-Aubry C, Ginami G, van Heeswijk R, Piccini D, Stuber M, Sauty A. A black-blood ultra-short echo time (UTE) sequence for 3D isotropic resolution imaging of the lungs - Magnetic Resonance in Medicine, 81: 3808-3818, June 2019
Albrecht M, Varga-Szemes A, Schoepf U, Nance J, De Cecco C, De Santis D, Tesche C, Eid M, Penmetsa M, Lesslie V, Piccini D, Goeller M, Wichmann J, Vogl T, Chowdhury S, Nutting A, Hlavacek A. Diagnostic Accuracy of Noncontrast Self-navigated Free-breathing MR Angiography versus CT Angiography: A Prospective Study in Pediatric Patients with Suspected Anomalous Coronary Arteries - Academic Radiology, 10: 1309-1317, October 2019
Delacoste J, Dunet V, Dournes G, Lovis A, Rohner C, Elandoy C, Simons J, Long O, Piccini D, Stuber M, Prior J, Nicod L, Beigelman-Aubry C. MR Volumetry of Lung Nodules: A Pilot Study - Frontiers in Medicine, 6: 18, February 2019
Bastiaansen J, van Heeswijk R, Stuber M, Piccini D. Noncontrast free-breathing respiratory self-navigated coronary artery cardiovascular magnetic resonance angiography at 3 T using lipid insensitive binomial off-resonant excitation (LIBRE) - Journal of Cardiovascular Magnetic Resonance, 21: 38, July 2019
Di Sopra L, Piccini D, Coppo S, Stuber M, Yerly J. An automated approach to fully self-gated free-running cardiac and respiratory motion-resolved 5D whole-heart MRI - Magnetic Resonance in Medicine, 82: 2118-2132, December 2019
Bastiaansen J, Piccini D, Di Sopra L, Roy C, Heerfordt J, Edelman R, Koktzoglou I, Yerly J, Stuber M. Natively fat-suppressed 5D whole-heart MRI with a radial free-running fast-interrupted steady-state (FISS) sequence at 1.5T and 3T - Magnetic Resonance in Medicine, 83: 45-55, January 2020
van Heeswijk R, Bastiaansen J, Iglesias J, Degrauwe S, Rotman S, Barras J, Regamey J, Lauriers N, Tozzi P, Yerly J, Ginami G, Stuber M, Hullin R. Quantification of myocardial interstitial fibrosis and extracellular volume for the detection of cardiac allograft vasculopathy - The International Journal of Cardiovascular Imaging, 36: 533-542, March 2020
Heerfordt J, Stuber M, Maillot A, Bianchi V, Piccini D. A quantitative comparison between a navigated Cartesian and a self-navigated radial protocol from clinical studies for free-breathing 3D whole-heart bSSFP coronary MRA - Magnetic Resonance in Medicine, 84: 157-169, December 2019
Darçot E, Colotti R, Pellegrin M, Wilson A, Siegert S, Bouzourene K, Yerly J, Mazzolai L, Stuber M, van Heeswijk R. Towards Quantification of Inflammation in Atherosclerotic Plaque in the Clinic – Characterization and Optimization of Fluorine-19 MRI in Mice at 3 T - Scientific Reports, 9(1): 17488, November 2019
Rutten S, Santoro R, Hervais-Adelman A, Formisano E, Golestani N. Cortical encoding of speech enhances task-relevant acoustic information - Nature Human Behavior, 3: 974-987, September 2019
Lei H, Dirren E, Poitry-Yamate C, Schneider BL, Gruetter R, Aebischer P. Evolution of the neurochemical profiles in the G93A-SOD1 mouse model of amyotrophic lateral sclerosis - Journal of Cerebral Blood Flow and Metabolism, 39: 1283–1298, July 2019
Lepore M, Buscemi L, Hirt L, Lei H. Metabolic fingerprints discriminating severity of acute ischemia using in vivo high-field 1 H magnetic resonance spectroscopy - Journal of Neurochemistry, : , January 2020
Boillat Y, Xin L, van der Zwaag W, Gruetter R. Metabolite concentration changes associated with positive and negative BOLD responses in the human visual cortex: A functional MRS study at 7 Tesla - Journal of Cerebral Blood Flow and Metabolism, : , March 2020
van de Looij Y, Larpin C, Cabungcal J, Sanches E, Toulotte A, Do K, Sizonenko S. Nutritional Intervention for Developmental Brain Damage: Effects of Lactoferrin Supplementation in Hypocaloric Induced Intrauterine Growth Restriction Rat Pups - Frontiers in Endocrinology, 10: 46, February 2019
Takado Y, Sato N, Kanbe Y, Tomiyasu M, Xin L, Near J, Yoshikawa K, Sahara N, Higashi T, Suhara T, Higuchi M, Obata T. Association between Brain and Plasma Glutamine Levels in Healthy Young Subjects Investigated by MRS and LC/MS - Nutrients, 11: 1649, July 2019
Strasser A, Xin L, Gruetter R, Sandi C. Nucleus accumbens neurochemistry in human anxiety: A 7 T 1H-MRS study - European Neuropsychopharmacology, 29: 365-375, January 2019
Soares A, Nissen J, Garcia-Serrano A, Nussbaum S, Waagepetersen H, Duarte J. Glycogen metabolism is impaired in the brain of male type 2 diabetic Goto-Kakizaki rats - Journal of Neuroscience Research, 97: 1004-1017, August 2019
Farias Sanches E, van de Looij Y, Toulotte A, Sizonenko S, Lei H. Mild Neonatal Brain Hypoxia-Ischemia in Very Immature Rats Causes Long-Term Behavioral and Cerebellar Abnormalities at Adulthood - Frontiers in Physiology, 10: 634, June 2019
Reynaud O, da Silva A, Gruetter R, Jelescu I. Multi-slice passband bSSFP for human and rodent fMRI at ultra-high field - Journal of Magnetic Resonance, 305: 31-40, August 2019
Protopapa F, Hayashi M, Kulashekhar S, van der Zwaag W, Battistella G, Murray M, Kanai R, Bueti D. Chronotopic maps in human supplementary motor area - PLOS Biology, 17: , March 2019
Poliaková M, Felser A, Pierzchala K, Nuoffer J, Aebersold D, Zimmer Y, Zamboni N, Medová M. Metabolomics reveals tepotinib-related mitochondrial dysfunction in MET-activating mutations-driven models. - FEBS Journal, 286: 2692-2710, July 2019
O'Donnell L, Daducci A, Wassermann D, Lenglet C. Advances in computational and statistical diffusion MRI - NMR in Biomedicine, 32: 3805, April 2019
Najdenovska E, Tuleasca C, Jorge J, Maeder P, Marques J, Roine T, Gallichan D, Thiran J, Levivier M, Bach C. Comparison of MRI-based automated segmentation methods and functional neurosurgery targeting with direct visualization of the Ventro-intermediate thalamic nucleus at 7T - Scientific Reports, 9(1): 1119, February 2019
Lizarbe B, Soares A, Larsson S, Duarte J. Neurochemical Modifications in the Hippocampus, Cortex and Hypothalamus of Mice Exposed to Long-Term High-Fat Diet - Frontiers in Neuroscience, 12: 985, January 2019