MRI
Ma L, Yerly J, Di Sopra L, Piccini D, Lee J, DiCarlo A, Passman R, Greenland P, Kim D, Stuber M, Markl M. Using 5D flow MRI to decode the effects of rhythm on left atrial 3D flow dynamics in patients with atrial fibrillation - Magnetic Resonance in Medicine, 85(6): 3125-3139, June 2021
Wenz D, Gruetter R. Dipole-fed rectangular dielectric resonator antennas for magnetic resonance imaging at 7 T: The impact of quasi-transverse electric modes on transmit field distribution - Frontiers in Physics, 9: 675509, June 2021
Mishkovsky M, Gusyatiner O, Lanz B, Cudalbu C, Vassallo I, Hamou M-F, Bloch J, Comment A, Gruetter R, Hegi ME. Hyperpolarized C-13-glucose magnetic resonance highlights reduced aerobic glycolysis in vivo in infiltrative glioblastoma - Scientific Reports, 11(1): 5771, March 2021
Squair JW, Gautier M, Mahe L, Soriano JE, Rowald A, Bichat A, Cho N, Anderson MA, James ND, Gandar J, Incognito AV, Schiavone G, Sarafis ZK, Laskaratos A, Bartholdi K, Demesmaeker R, Komi S, Moerman C, Vaseghi B, Scott B, Rosentreter R, Kathe C, Ravier J. Neuroprosthetic baroreflex controls haemodynamics after spinal cord injury - Nature, 590: 308–314, January 2021
Rackayová V, Flatt E, Braissant O, Grosse J, Capobianco D, Mastromarino P, McMillin M, DeMorrow S, McLin VA, Cudalbu C. Probiotics improve the neurometabolic profile of rats with chronic cholestatic liver disease - Scientific Reports, 11: , January 2021
Darçot E, Yerly J, Hilbert T, Colotti R, Najdenovska E, Kober T, Stuber M, van Heeswijk R. Compressed sensing with signal averaging for improved sensitivity and motion artifact reduction in fluorine-19 MRI - NMR in Biomedicine, 34(1): , January 2021
Sa de Almeida J, Meskaldji DE, Loukas S, Lordier L, Gui L, Lazeyras F, Hüppi PS. Preterm birth leads to impaired rich-club organization and fronto-paralimbic/limbic structural connectivity in newborns - NeuroImage, 225: , January 2021
Yoo J, Jin KH, Gupta H, Yerly J, Stuber M, Unser M. Time-dependent deep image prior for dynamic MRI - Cornell University, : , January 2021
Tristão Pereira C, Diao Y, Yin T, da Silva A, Lanz B, Pierzchala K, Poitry-Yamate C, Jelescu I. Synchronous nonmonotonic changes in functional connectivity and white matter integrity in a rat model of sporadic Alzheimer’s disease - NeuroImage, 225: , January 2021
Duran-Trio L, Fernandes-Pires G, Simicic D, Grosse J, Roux-Petronelli C, Bruce SJ, Binz PA, Sandi C, Cudalbu C, Braissant O. A new rat model of creatine transporter deficiency reveals behavioral disorder and altered brain metabolism - Scientific Reports, 11: , January 2021
Öz G, Deelchand DK, Wijnen JP, Mlynárik V, Xin L, Mekle R, Noeske R, Scheenen TWJ, Tkáč I. Advanced single voxel 1 H magnetic resonance spectroscopy techniques in humans: Experts’ consensus recommendations - NMR in Biomedicine, 34: e4236, January 2021
Račkayová V, Simicic D, Donati G, Braissant O, Gruetter R, McLin VA, Cudalbu C. Late post-natal neurometabolic development in healthy male rats using 1 H and 31 P Magnetic Resonance Spectroscopy - Journal of Neurochemistry, : , January 2021
Cuenoud B, Ipek O, Shevlyakova M, Beaumont M, Cunnane S, Gruetter R, Xin L. Brain NAD is associated with ATP energy production and membrane phospholipid turnover in humans - Frontiers in Aging Neuroscience, 12: 609517, December 2020
Darçot E, Delacoste J, Dunet V, Dournes G, Rotzinger D, Bernasconi M, Vremaroiu P, Simons J, Long O, Rohner C, Ledoux JB, Stuber M, Lovis A, Beigelman-Aubry C. Lung MRI assessment with high-frequency noninvasive ventilation at 3 T - Magnetic Resonance Imaging, 74: 64-73, December 2020
Pievani M, Jelescu IO, Jorge J, Reynaud O, Andryszak P, Garibotto V, Jovicich J, Frisoni G. In-vivo imaging of locus coeruleus integrity at ultra-high field: A feasibility study - Alzheimer's & Dementia, 16(4): , December 2020
Cudalbu C, Behar KL, Bhattacharyya PK, Bogner W, Borbath T, de Graaf RA, Gruetter R, Henning A, Juchem C, Kreis R, Lee P, Lei H, Marjańska M, Mekle R, Murali-Manohar S, Považan M, Rackayová V, Simicic D, Slotboom J, Soher BJ, Starčuk Z Jr, Starčuková J, Tkáč I, Williams S, Wilson M, Wright AM, Xin L, Mlynárik V. Contribution of macromolecules to brain 1 H MR spectra: Experts’ consensus recommendations - NMR in Biomedicine, : e4393, November 2020
Ma LE, Yerly J, Piccini D, Di Sopra L, Roy CW, Carr JC, Rigsby C, Kim D, Stuber M, Markl M. 5D Flow MRI: A fully self-gated, Free-running Framework for cardiac and respiratory motion-resolved 3D hemodynamics - Radiology Cardiothoracic Imaging, 2(6): e200219, November 2020
Ge Y, Steel K, Antiochos P, Bingham S, Abdullah S, Mikolich JR, Arai A, Bandettini P, Shanbhag S, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Nawaz H, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R. Stress CMR in patients with obesity: insights from the stress CMR perfusion imaging in the United States (SPINS) registry - European Heart Journal Cardiovascular Imaging, : , November 2020
Ge Y, Antiochos P, Steel K, Bingham S, Abdullah S, Chen Y-Y, Mikolich JR, Arai A, Bandettini P, Shanbhag S, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R. Prognostic value of stress CMR perfusion imaging in patients with reduced left ventricular function - JACC Cardiovascular Imaging, 13(10): 2132–2145, October 2020
Jelescu IO, Palombo M, Bagnato F, Schilling K. Challenges for biophysical modeling of microstructure - Journal of Neuroscience Methods, 344: 108861, October 2020
Lorton O, Guillemin P, Holman R, Desgranges S, Gui L, Crowe LA, Terraz S, Nastasi A, Lazeyras F, Contino-Pépin C, Salomir R. Enhancement of HIFU thermal therapy in perfused tissue models using micron-sized FTAC-stabilized PFOB-core endovascular sonosensitizer - International Journal of Hyperthermia, 37(1): 116-1130, September 2020
Skupienski R, Do KQ, Xin L. In vivo 31P magnetic resonance spectroscopy study of mouse cerebral NAD content and redox state during neurodevelopment - Scientific Reports, 10: 15623, September 2020
Masala N, Bastiaansen JAM, Di Sopra L, Roy CW, Piccini D, Yerly J, Colotti R, Stuber M. Free-running 5D coronary MR angiography at 1.5T using LIBRE water excitation pulses - Magnetic Resonance in Medicine, 84(3): 1470-1485, September 2020
Longchamp A, Klauser A, Songeon J, Agius T, Nastasi A, Ruttiman R, Moll S, Meier RPH, Buhler L, Corpataux JM, Lazeyras F. Ex vivo analysis of kidney graft viability using 31P magnetic resonance imaging spectroscopy - Transplantation, 104(9): 1825-1831, September 2020
Lanz B, Abaei A, Braissant O, Choi IY, Cudalbu C, Henry PG, Gruetter R, Kara F, Kantarci K, Lee P, Lutz N, Marjańska M, Mlynárik V, Rasche V, Xin L, Valette J. Magnetic resonance spectroscopy in the rodent brain: Experts’ consensus recommendations - NMR in Biomedicine, : e4325, August 2020
Antiochos P, Ge Y, Steel K, Bingham S, Abdullah S, Mikolich JR, Arai AE, Bandettini P, Patel A, Farzaneh-Far A, Heitner JF, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R, SPINS Study Investigators. Imaging of clinically unrecognized myocardial fibrosis in patients with suspected coronary artery disease - Journal of the American College of Cardiology, 76(8): 945-957, August 2020
Kreis R, Boer V, Choi IY, Cudalbu C, de Graaf RA, Gasparovic C, Heerschap A, Krššák M, Lanz B, Maudsley AA, Meyerspeer M, Near J, Öz G, Posse S, Slotboom J, Terpstra M, Tkáč I, Wilson M, Bogner W. Terminology and concepts for the characterization of in vivo MR spectroscopy methods and MR spectra: Background and experts’ consensus recommendations - NMR in Biomedicine, : , August 2020
Strasser A, Luksys G, Xin L, Pessiglione M, Gruetter R, Sandi C. Glutamine-to-glutamate ratio in the nucleus accumbens predicts effort-based motivated performance in humans - Neuropsychopharmacology, 45(12): 2048–2057, November 2020
Lajous H, Hilbert T, Roy CW, Tourbier S, de Dumast P, Yu T, Thiran JP, Ledoux JB, Piccini D, Hagmann P, Meuli R, Kober T, Stuber M, van Heeswijk RB, Bach Cuadra M. T2 mapping from super-resolution-reconstructed clinical fast spin echo magnetic resonance acquisitions - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, 12262: 114-124, Lima, Peru, October 2020
Denervaud S, Fornari E, Yang X-F, Hagmann P, Immordino-Yang MH, Sander D. An fMRI study of error monitoring in Montessori and traditionally-schooled children - npj Science of Learning, 5(11): , July 2020
Ge Y, Pandya A, Steel K, Bingham S, Jerosch-Herold M, Chen YY, Mikolich R, Arai A, Bandettini P, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Hachamovitch R, Stuber M, Simonetti O, Kwong R. Cost-effectiveness analysis of stress cardiovascular magnetic resonance imaging for stable chest pain syndromes - JACC Cardiovasc Imaging, 13(7): 1505-1517, July 2020
Antiochos P, Ge Y, Steel K, Chen Y-Y, Bingham S, Abdullah S, Mikolich JR, Arai A, Bandettini P, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Murthy V, Kwong R. Evaluation of Stress Cardiac Magnetic Resonance Imaging in risk reclassification of patients with suspected coronary artery disease - JAMA Cardiology, : e202834, July 2020
Adam-Darque A, Freitas L, Grouiller F, Sauser J, Lazeyras F, Van De Ville D, Pollien P, Garcia-Rodenas CL, Bergonzelli G, Hüppi PS, Ha-Vinh Leuchter R. Shedding light on excessive crying in babies - Pediatric Research, : , July 2020
Franceschiello B, Di Sopra L, Minier A, Ionta S, Zeugin D, Notter MP, Bastiaansen JAM, Jorge J, Yerly J, Stuber M, Murray MM. 3-dimensional magnetic resonance imaging of the freely moving human eye - Progress in Neurobiology, 194(101885): , July 2020
Hayoz R, Vietti-Violi N, Duran R, Knebel JF, Ledoux JB, Dromain C. The combination of hepatobiliary phase with Gd-EOB-DTPA and DWI is highly accurate for the detection and characterization of liver metastases from neuroendocrine tumor - European Radiology, 30(12): 6593-6602, June 2020
Juchem C, Cudalbu C, de Graaf RA, Gruetter R, Henning A, Hetherington HP, Boer VO. B0 shimming for in vivo magnetic resonance spectroscopy: Experts’ consensus recommendations - NMR in Biomedicine, (e4350): , June 2020
Gudmundsson L, Vohryzek J, Fornari E, Clarke S, Hagmann P, Crottaz-Herbette S. A brief exposure to rightward prismatic adaptation changes resting-state network characteristics of the ventral attentional system - PLOS One, 15: e0234382, June 2020
Adam-Darque A, Pittet MP, Grouiller F, Rihs TA, Leuchter RH, Lazeyras F, Michel CM, Hüppi PS. Neural correlates of voice perception in newborns and the influence of preterm birth - Cerebral Cortex, 9(144): , June 2020
Piccini D, Demesmaeker R, Heerfordt J, Yerly J, Di Sopra L, Masci PG, Schwitter J, Van De Ville D, Richiardi J, Kober T, Stuber M. Deep learning to automate reference-free image quality assessment of whole-heart MR images - Radiology: Artificial Intelligence, 2(3): e190123, May 2020
Dong J, Jelescu I, Ades-Aron B, Novikov D, Friedman K, Babb J, Osorio R, Galvin J, Shepherd T, Fieremans E. Diffusion MRI biomarkers of white matter microstructure vary nonmonotonically with increasing cerebral amyloid deposition - Neurobiology of Aging, 89: 118-128, May 2020
Rackayova V, Braissant O, Rougemont AL, Cudalbu C, McLin VA. Longitudinal osmotic and neurometabolic changes in young rats with chronic cholestatic liver disease - Scientific Reports, 10(7536): , May 2020
Sa de Almeida J, Lordier L, Zollinger B, Kunz N, Bastiani M, Gui L, Adam-Darque A, Borradori-Tolsa C, Lazeyras F, Hüppi P. Music enhances structural maturation of emotional processing neural pathways in very preterm infants - NeuroImage, 207: 116391, February 2020
Lepore M, Buscemi L, Hirt L, Lei H. Metabolic fingerprints discriminating severity of acute ischemia using in vivo high-field 1 H magnetic resonance spectroscopy - Journal of Neurochemistry, 152(2): 252-262, January 2020
Boillat Y, Xin L, van der Zwaag W, Gruetter R. Metabolite concentration changes associated with positive and negative BOLD responses in the human visual cortex: A functional MRS study at 7 Tesla - Journal of Cerebral Blood Flow and Metabolism, 40(3): 488-500, March 2020
Caballero-Gaudes C, Van de Ville D, Grouiller F, Thornton R, Lemieux L, Seeck M, Lazeyras F, Vulliemoz S.. Mapping interictal epileptic discharges using mutual information between concurrent EEG and fMRI - NeuroImage, 68: 248-62, March 2013
Vulliemoz S, Lemieux L, Daunizeau J, Michel CM, Duncan JS. The combination of EEG source imaging and EEG-correlated functional MRI to map epileptic networks - Epilepsia, 51(4): 491-505, April 2010
Britz J, Van De Ville D, Michel CM. BOLD correlates of EEG topography reveal rapid resting-state network dynamics - NeuroImage, 52(4): 1162-70, February 2010
Martuzzi R, Murray MM, Michel CM, Thiran JP, Maeder PP, Clarke S, Meuli RA. Multisensory interactions within human primary cortices revealed by BOLD dynamics - Cerebral Cortex, 17(7): 1672-9, July 2007
Barakovic M, Leuze C, Crow A, Tian Q, Daducci A, Thiran JP, Deisseroth K, McNab J. Comparing fiber orientation estimates from CLARITY and Diffusion MRI in macaque visual cortex - International Society for Magnetic Resonance in Medicine (ISMRM) 27th Annual Meeting & Exhibition, : , Montréal, Canada, May 2019
Canales-Rodríguez EJ, Haitz Legarreta J, Pizzolato M, Rensonnet G, Girard G, Patino J, Barakovic M, Romascano D, Alemán-Gómez Y, Radua J, Pomarol-Clotet E, Salvador R, Thiran JP, Daducci A. Sparse wars: A survey and comparative study of spherical deconvolution algorithms for diffusion MRI - NeuroImage, 184: 140-160, January 2019
Rensonnet G, Scherrer B, Girard G, Jankovski A, Warfield SK, Macq B, Thiran JP, Taquet M. Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations - NeuroImage, 184: 964-980, January 2019
Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Patino JR, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez E, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches - NeuroImage, 185: 1-11, January 2019
Girault FM, Sonnay S, Gruetter R, Duarte JMN. Alterations of Brain Energy Metabolism in Type 2 Diabetic Goto-Kakizaki Rats Measured In Vivo by 13C Magnetic Resonance Spectroscopy - Neurotoxicity Research, 36(2): 268-278, August 2019
Vietti Violi N, Hilbert T, Bastiaansen JAM, Knebel JF, Ledoux JB, Stemmer A, Meuli R, Kober T, Schmidt S. Patient respiratory-triggered quantitative T2 mapping in the pancreas - Journal of Magnetic Resonance Imaging, 50(2): 410-416, August 2019
Notter MP, Gale D, Herholz P, Markello R, Notter-Bielser ML, Whitaker K. A Python package to generate coordinate tables, region labels, and informative figures from statistical MRI images - Journal of Open Source Software, 4(34): 1257, February 2019