Publications
Blefari ML, Martuzzi R, Salomon R, Bello-Ruiz J, Herbelin B, Serino A, Blanke O. Bilateral Rolandic operculum processing underlying heartbeat awareness reflects changes in bodily self-consciousness - European Journal of Neuroscience, 45(10): 1300-1312, March 2017
Blanke A, Schmitz H, Patera A, Dutel H, Fagan MJ. Form-function relationships in dragonfly mandibles under an evolutionary perspective - Journal of The Royal Society Interface, 14(128): 20161038, March 2017
Ciller C, De Zanet S, Kamnitsas K, Maeder P, Glocker B, Munier FL, Rueckert D, Thiran JP, Bach Cuadra M, Sznitman R. Multi-channel MRI segmentation of eye structures and tumors using patient-specific features - PLOS One, 12(3): e0173900, March 2017
Sonnay S, Duarte JMN, Just N. Lactate and glutamate dynamics during prolonged stimulation of the rat barrel cortex suggest adaptation of cerebral glucose and oxygen metabolism - Neuroscience, 346: 337-348, March 2017
Gallichan D, Marques JP. Optimizing the acceleration and resolution of three-dimensional fat image navigators for high-resolution motion correction at 7T - Magnetic Resonance in Medicine, 77(2): 547-558, February 2017
Drommelschmidt K, Serdar M, Bendix I, Herz J, Bertling F, Prager S, Keller M, Ludwig A, Duhan V, Radtke S, de Miroschedji K, Horn P, van de Looij Y, Giebel B, Felderhoff-Müser U. Mesenchymal stem cell-derived extracellular vesicles ameliorate inflammation-induced preterm brain injury - Brain, Behavior and Immunity, 60: 220-232, February 2017
Taiwo OO, Paz-García JM, Hall SA, Heenan TMM, Finegan DP, Mokso R, Villanueva-Pérez P, Patera A, Brett DJL, Shearing PR. Microstructural degradation of silicon electrodes during lithiation observed via operando X-ray tomographic imaging - Journal of Power Sources, 342: 904-912, February 2017
Marques JP, Khabipova D, Gruetter R. Studying cyto and myeloarchitecture of the human cortex at ultra-high field with quantitative imaging: R1, R2* and magnetic susceptibility - NeuroImage, 147: 152-163, February 2017
Sage D, Donati L, Soulez F, Fortun D, Schmit G, Seitz A, Guiet R, Vonesch C, Unser M. DeconvolutionLab2: An open-source software for deconvolution microscopy - Methods, 115: 28-41, February 2017
Ghazaleh N, van der Zwaag W, Clarke S, Vandeville D, Maire R, Saenz M. High-Resolution fMRI of Auditory Cortical Map Changes in Unilateral Hearing Loss and Tinnitus - Brain Topography, 30: 685–697, February 2017
Cid YD, Muller H, Platon A, Poletti PA, Depeursinge A. 3D Solid Texture Classification Using Locally-Oriented Wavelet Transforms - IEEE Transactions on Image Processing, 26(4): 1899-1910, February 2017
Engelhardt C, Farron A, Becce F, Place N, Pioletti DP, Terrier A. Effects of glenoid inclination and acromion index on humeral head translation and glenoid articular cartilage strain - Journal of Shoulder and Elbow Surgery, 26(1): 157-164, January 2017
Bano W, Feliciano H, Coristine AJ, Stuber M, van Heeswijk RB. On the accuracy and precision of cardiac magnetic resonance T2 mapping: A high-resolution radial study using adiabatic T2 preparation at 3T - Magnetic Resonance in Medicine, 77(1): 159-169, January 2017
Avena-Koenigsberger A, Mišić B, Hawkins RXD, Griffa A, Hagmann P, Goñi J, Sporns O. Path ensembles and a tradeoff between communication efficiency and resilience in the human connectome - Brain Structure and Function, 222(1): 603-618, January 2017
Just N, Sonnay S. Investigating the Role of Glutamate and GABA in the Modulation of Transthalamic Activity: A Combined fMRI-fMRS Study - Frontiers in Physiology, 8: 30, January 2017
Driencourt L, Romero CJ, Lepore M, Eggenschwiler F, Reynaud O, Just N. T1 mapping of the mouse brain following fractionated manganese administration using MP2RAGE - Brain Structure and Function, 222(1): 201-214, January 2017
Chavan C, Mouthon M, Simonet M, Hoogewoud H-M, Draganski B, van der Zwaag W, Spierer L. Sustained enhancements in inhibitory control depend primarily on the reinforcement of fronto-basal anatomical connectivity - Brain Structure and Function, 222(1): 635-643, January 2017
Colin DJ, Inkster JAH, Germain S, Seimbille Y. Preclinical validations of [18F]FPyPEGCBT-c(RGDfK): a 18F-labelled RGD peptide prepared by ligation of 2-cyanobenzothiazole and 1,2-aminothiol to image angiogenesis - EJNMMI Radiopharmacy and Chemistry, 1(1): 16, 2017
Rideau Batista Novais A, Pham H, Van de Looij Y, Bernal M, Mairesse J, Zana-Taieb E, Colella M, Jarreau P, Pansiot J, Dumont F, Sizonenko S, Gressens P, Charriaut-Marlangue C, Tanter M, Demene C, Vaiman D, Baud O. Transcriptomic regulations in oligodendroglial and microglial cells related to brain damage following fetal growth restriction - Glia, 64(12): 2306-2320, December 2016
Rackayova V, Braissant O, McLin VA, Berset C, Lanz B, Cudalbu C. 1H and 31P magnetic resonance spectroscopy in a rat model of chronic hepatic encephalopathy: in vivo longitudinal measurements of brain energy metabolism - Metabolic Brain Disease, 31(6): 1303-1314, December 2016
Bémeur C, Cudalbu C, Dam G, Thrane AS, Cooper AJL, Rose CF. Brain edema: a valid endpoint for measuring hepatic encephalopathy? - Metabolic Brain Disease, 31(6): 1249-1258, December 2016
Unser M, Fageot J, Ward JP. Splines Are Universal Solutions of Linear Inverse Problems with Generalized TV Regularization - SIAM Review, 59(4): 769–793, December 2016
Muñoz-Moreno E, Fischi-Gomez E, Batalle D, Borradori-Tolsa C, Eixarch E, Thiran JP, Gratacós E, Hüppi PS. Structural Brain Network Reorganization and Social Cognition Related to Adverse Perinatal Condition from Infancy to Early Adolescence - Frontiers in Neuroscience, 10: 560, December 2016
Guinchard AC, Ghazaleh N, Saenz M, Fornari E, Prior JO, Maeder P, Adib S, Maire R. Study of tonotopic brain changes with functional MRI and FDG-PET in a patient with unilateral objective cochlear tinnitus - Hearing Reasearch, 341: 232-239, November 2016
Porcari P, Hegi ME, Lei H, Hamou MF, Vassallo I, Capuani S, Gruetter R, Mlynarik V. Early detection of human glioma sphere xenografts in mouse brain using diffusion MRI at 14.1T - NMR in Biomedicine, 29(11): 1577-1589, November 2016
Meyerspeer M, Magill AW, Kuehne A, Gruetter R, Moser E, Schmid AI. Simultaneous and interleaved acquisition of NMR signals from different nuclei with a clinical MRI scanner - Magnetic Resonance in Medicine, 76(5): 1636–1641, November 2016
Yerly J, Ginami G, Nordio G, Coristine AJ, Coppo S, Monney P, Stuber M. Coronary endothelial function assessment using self-gated cardiac cine MRI and k-t sparse SENSE - Magnetic Resonance in Medicine, 76(5): 1443-1454, November 2016
Frühholz S, van der Zwaag W, Saenz M, Belin P, Schobert A-K, Vuilleumier P, Grandjean D. Neural Decoding of Discriminative Auditory Object Features Depends on Their Socio-Affective Valence - Social Cognitive and Affective Neuroscience, 11(10): 1638-49, October 2016
Coristine AJ, Yerly J, Stuber M. A Cylindrical, Inner Volume Selecting 2D-T2-Prep Improves GRAPPA-Accelerated Image Quality in MRA of the Right Coronary Artery - PLOS One, 11(10): e0163618, October 2016
Meskaldji DE, Preti MG, Bolton TA, Montandon ML, Rodriguez C, Morgenthaler S, Giannakopoulos P, Haller S, Van De Ville D. Prediction of long-term memory scores in MCI based on resting-state fMRI - NeuroImage: Clinical, 12: 785-795, October 2016
Esteban O, Zosso D, Daducci A, Bach-Cuadra M, Ledesma-Carbayo M, Thiran JP, Santos A. Surface-driven registration method for the structure-informed segmentation of diffusion MR images - NeuroImage, 139: 450-461, October 2016
Scariati E, Schaer M, Karahanoglu I, Schneider M, Richiardi J, Debbané M, Van De Ville D, Eliez S. Large-scale functional network reorganization in 22q11.2 deletion syndrome revealed by modularity analysis - Cortex, 82: 86-99, September 2016
Gapp K, Corcoba A, van Steenwyk G, Mansuy IM, Duarte JMN. Brain metabolic alterations in mice subjected to postnatal traumatic stress and in their offspring - Journal of Cerebral Blood Flow & Metabolism, 37(7): 2423-32, September 2016
van der Zwaag W, Schafer A, Marques JP, Turner R, Trampel R. Recent applications of UHF-MRI in the study of human brain function and structure: a review - NMR in Biomedicine, 29(9): 1274-88, September 2016
Baker L, Lanz B, Andreola F, Ampuero J, Wijeyesekera A, Holmes E, Deutz N. New technologies – new insights into the pathogenesis of hepatic encephalopathy - Metabolic Brain Disease, 31(6): 1259-1267, September 2016
Fabbiano S, Suárez-Zamorano N, Rigo D, Veyrat-Durebex C, Stevanovic Dokic A, Colin Didier J, Trajkovski M. Caloric Restriction Leads to Browning of White Adipose Tissue through Type 2 Immune Signaling - Cell Metabolism, 24(3): 434-446, September 2016
Lovric G, Mokso R, Schlepütz CM, Stampanoni M. A multi-purpose imaging endstation for high-resolution micrometer-scaled sub-second tomography - Physica Medica, 32(12): 1771-8, August 2016
Nishihara T, Yoshihara HA, Nonaka H, Takakusagi Y, Hyodo F, Ichikawa K, Can E, Bastiaansen J, Takado Y, Comment A, Sando S. Direct Monitoring of gamma-Glutamyl Transpeptidase Activity In Vivo Using a Hyperpolarized (13) C-Labeled Molecular Probe - Angewandte Chemie, 55(36): 10626-9, August 2016
Cheng T, Mishkovsky M, Junk MJ, Munnemann K, Comment A. Producing Radical-Free Hyperpolarized Perfusion Agents for In Vivo Magnetic Resonance Using Spin-Labeled Thermoresponsive Hydrogel - Macromolecular Rapid Communications, 37(13): 1074-8, July 2016
Abreu R, Leite M, Jorge J, Grouiller F, van der Zwaag W, Leal A, Figueiredoa P. Ballistocardiogram artifact correction taking into account physiological signal preservation in simultaneous EEG-fMRI - NeuroImage, 135: 45-63, July 2016
Hoeber D, Sifringer M, van de Looij Y, Herz J, Sizonenko SV, Kempe K, Serdar M, Palasz J, Hadamitzky M, Endesfelder S, Fandrey J, Felderhoff-Müser U, Bendix I. Erythropoietin Restores Long-Term Neurocognitive Function Involving Mechanisms of Neuronal Plasticity in a Model of Hyperoxia-Induced Preterm Brain Injury - Oxidative Medicine and Cellular Longevity, 2016: 9247493, July 2016
Esteban O, Zosso D, Daducci A, Bach-Cuadra M, Ledesma-Carbayo MJ, Thiran JP, Santos A1. Data on the verification and validation of segmentation and registration methods for diffusion MRI - Data in Brief, 8: 871-6, July 2016
Narsude M, Gallichan D, van der Zwaag W, Gruetter R, Marques JP. Three-dimensional echo planar imaging with controlled aliasing: A sequence for high temporal resolution functional MRI - Magnetic Resonance in Medicine, 75(6): 2350-61, June 2016
Eggenschwiler F, O'Brien KR, Gallichan D, Gruetter R, Marques JP. 3D T 2-weighted imaging at 7T using dynamic kT-points on single-transmit MRI systems - MAGMA, 29(3): 347-58, June 2016
Fartaria M, Bonnier G, Roche A, Kober T, Meuli R, Rotzinger D, Frackowiak R, Schluep M, Du Pasquier R, Thiran J, Krueger G, Bach Cuadra M, Granziera C. Automated detection of white matter and cortical lesions in early stages of multiple sclerosis - Journal of Magnetic Resonance Imaging, 43(6): 1445-54, June 2016
McCann MT, Nilchian M, Stampanoni M, Unser M. Fast 3D reconstruction method for differential phase contrast X-ray CT - Optics Express, 24(13): 14564-81, June 2016
Daducci A, Dal Palú A, Descoteaux M, Thiran J-P. Microstructure informed tractography: pitfalls and open challenges - Frontiers in Neuroscience, 10: 247, June 2016
Sonnay S, Duarte JM, Just N, Gruetter R. Compartmentalised energy metabolism supporting glutamatergic neurotransmission in response to increased activity in the rat cerebral cortex: A 13C MRS study in vivo at 14.1 T - Journal of Cerebral Blood Flow and Metabolism, 36(5): 928-40, May 2016
Ginet V, van de Looij Y, Petrenko V, Toulotte A, Kiss J, Hüppi PS, Sizonenko S. Lactoferrin during lactation reduces lipopolysaccharide-induced brain injury - BioFactors, 42(3): 323-36, May 2016
Fortun D, Bouthemy P, Kervrann C. A Variational Aggregation Framework for Patch-Based Optical Flow Estimation - Journal of Mathematical Imaging and Vision, 56(2): 280-99, May 2016
Federau C, Gallichan D. Motion-Correction Enabled Ultra-High Resolution In-Vivo 7T-MRI of the Brain - PLOS One, 11(5): e0154974, May 2016
Trombella S, Garcia D, Colin DJ, Germain S, Seimbille Y, Ratib O. [11C] acetate and PET/CT assessment of muscle activation in rat studies - International Journal of Computer Assisted Radiology and Surgery, 11(5): 733-43, May 2016
Bastiaansen JA, Merritt ME, Comment A. Measuring changes in substrate utilization in the myocardium in response to fasting using hyperpolarized [1-(13)C]butyrate and [1-(13)C]pyruvate - Scientific Reports, 6: 25573, May 2016
Emmert K, Kopel R, Sulzer J, Brühl A, Berman B, Linden D, Horovitz S, Breimhorst M, Caria A, Frank S, Johnston S, Long Z, Paret C, Robineau F, Veit R, Bartsch A, Beckmann C, Van De Ville D, Haller S. Meta-analysis of real-time fMRI neurofeedback studies using individual participant data: How is brain regulation mediated? - NeuroImage, 124(Pt A): 806-812, January 2016
Xin L, Mekle R, Fournier M, Baumann PS, Ferrari C, Alameda L, Jenni R, Lu H, Schaller B, Cuenod M, Conus P, Gruetter R, Do KQ. Genetic Polymorphism Associated Prefrontal Glutathione and Its Coupling With Brain Glutamate and Peripheral Redox Status in Early Psychosis - Schizophrenia Bulletin, 42(5): 1185-1196, April 2016