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Tuleasca C, Bolton T, Régis J, Najdenovska E, Witjas T, Girard N, Thiran JP, Levivier M, Van De Ville D. Thalamotomy for tremor normalizes aberrant pre-therapeutic visual cortex functional connectivity - Brain, 142(11): e57, November 2019
Hilbert T, Schulz J, Marques JP, Thiran JP, Krueger G, Norris DG, Kober T. Fast model‐based T2 mapping using SAR‐reduced simultaneous multislice excitation - Magnetic Resonance in Medicine, 82(6): 2090-2103, December 2019
Debbane M, Lazouret M, Lagioia A, Schneider M, Van De Ville D, Eliez S. Resting-state networks in adolescents with 22q11.2 deletion syndrome: Associations with prodromal symptoms and executive functions - Schizophrenia Research, 139(1-3): 33-9, August 2012
Tourbier S, Aleman-Gomez Y, Griffa A, Bach Cuadra M, Hagmann P. Multi-Scale Brain Parcellator: a BIDS App for the Lausanne Connectome Parcellation - 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM), : , Rome, Italy, June 2019
Alemán-Gómez Y, Fernández-Pena A, Mullier E, Tourbier S, Griffa A, Baumann PS, Bach Cuadra M, Hagmann P. A unified multi-scale probabilistic atlas of the human gray matter - 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM), : , Rome, Italy, June 2019
Alemán-Gómez Y, Baumgartner T, Roine T, Najdenovska E, Rovo Z, Conus P, Do K, Steullet P, Bach Cuadra M, Baumann PS. Microstructure of the thalamus in early psychosis and chronic patients based on diffusion weighted magnetic resonance imaging - National Centers of Competence in Research Meeting 2019, 33(5): 440–448, March 2019
Steullet P, Cabungcal JH, Aleman Y, Baumgartner T, Rovò Z, Baumann P, Bach Cuadra M, Conus P, Do KQ. Reticular, mediodorsal and pulvinar thalamic nuclei in schizophrenia: potential role of redox dysregulation - Society of Biological Psychiatry Annual Meeting, : , Chicago, USA, May 2019
Rahmanzadeh R, Lu PJ, Weigel M, Galbusera R, La Rosa F, Bach Cuadra M, Schiavi S, Radue EW, Kuhle J, Kappos L, Granziera C. Axonal damage explains part of and extends beyond the diffuse pathology evidenced by T1 mapping in normal-appearing white matter of multiple sclerosis patients - Multiple Sclerosis Journal, 25(7): 683-684, June 2019
Rahmanzadeh R, Lu PJ, Weigel M, Galbusera R, Nguyen TD, Schiavi S, Wang Y, La Rosa F, Bach Cuadra M, Radue EW, Kuhle J, Kappos L, Granziera C. Axonal and myelin injury in white matter and cortex of relapsing-remitting and progressive multiple sclerosis patients: a combined myelin water and multi-shell diffusion MRI study - Multiple Sclerosis Journal, 25(7): 682-683, June 2019
Lu PJ, Rahmanzadeh R, Galbusera R, Odry B, Weigel M, La Rosa F, Bach Cuadra M, Nguyen T, Wang Y, Daducci A, Kuhle J, Cattin P, Kappos L, Granziera C. Deep learning analysis applied to multi-parametric advanced MRI shows higher myelin content and neurite density in juxtacortical lesions compared to periventricular lesions - Multiple Sclerosis Journal, 25(7): 241- 242, June 2019
La Rosa F, Joao Fartaria M, Abdulkadir A, Rahmanzadeh R, Lu PJ, Galbusera R, Granziera C, Thiran JP, Bach Cuadra M. Deep learning-based detection of cortical lesions in multiple sclerosis patients with FLAIR, DIR, and MP2RAGE MRI sequences - Multiple Sclerosis Journal, 25(7): 131-356, June 2019
Fartaria MJ, Richiardi J, Maggi P , Sati P, Reich DS, Granziera C, Bach Cuadra M, Kober T. Differential diagnosis of multiple sclerosis based on the central vein sign assessment using deep learning: a multicentre study - International Society for Magnetic Resonance in Medicine (ISMRM) 27th Annual Meeting & Exhibition, : , Montreal, Canada, May 2019
Deman P, Tourbier S, Khawam M, de Dumast P, Kebiri H, Lajous H, Maeder P, Hagmann P, Meuli R, Dunet V, Koob M, Bach Cuadra M. Super-Resolution Foetal Magnetic Resonance Imaging for computer assisted diagnosis and quantitative analysis - Swiss Perinatal Research, : , Lausanne, Switzerland, May 2019
Najdenovska E, Masci PG, Giulia Pavon A, Bach Cuadra M, Schwitter J. A novel clustering approach applied to T1 mapping time series to identify microvascular obstruction in patients with sub-acute ST-elevation myocardial infarction - Society for Cardiovascular Magnetic Resonance (SCMR) Annual Scientific Sessions, : , Seattle, USA, February 2019
de Graaf P, Nguyen HG, de Bloeme C, Meije Wink A, Steenwijk MD, Pica A, Sznitman R, Bach Cuadra M. Automated segmentation of eye structures and retinoblastoma on MRI using Unet with statistical shape priors - European Congress of Radiology, : , Vienne, Autriche, February 2019
Nguyen HG, Hrbacek J, Weber DC, Sznitman R, Bach Cuadra M, Pica A. A novel deep-learning framework applies to analysis the image characteristics of uveal melanoma tissue in MRI - 58th Annual Conference of the Particle Therapy Co-operative Group, : , Manchester, England, June 2019
Nguyen HG, Pica A, Hrbacek J, Weber DC, La Rosa F, Schalenbourg A, Sznitman R, Bach Cuadra M. A novel segmentation framework for uveal melanoma in magnetic resonance imaging based on class activation maps - 2nd International Conference on Medical Imaging with Deep Learning, 102: 370-379, 2019
Jorge J, Gretsch F, Najdenovska E, Tuleasca C, Levivier M, Maeder P, Gallichan D, Marques JP, Bach Cuadra M. Improved susceptibility-weighted imaging for high contrast and resolution thalamic nuclei mapping at 7T - Magnetic Resonance in Medicine, 84(3): 1218-1234, February 2020
Tuleasca C, Régis J, Najdenovska E, Witjas T, Girard N, Thiran JP, Bach Cuadra M, Levivier M, Van De Ville D. Letter to the Editor. Resting-state functional MRI for functional neurosurgery: seeing the light? - Journal of Neurosurgery, : 1-2, May 2019
Tuleasca C, Bolton TAW, Régis J, Najdenovska E, Witjas T, Girard N, Delaire F, Vincent M, Faouzi M, Thiran JP, Bach Cuadra M, Levivier M, Van De Ville D. Normalization of aberrant pretherapeutic dynamic functional connectivity of extrastriate visual system in patients who underwent thalamotomy with stereotactic radiosurgery for essential tremor: a resting-state functional MRI study - Journal of Neurosurgery, : 1-10, May 2019
Fartaria MJ, Kober T, Granziera C, Bach Cuadra M. Longitudinal analysis of white matter and cortical lesions in multiple sclerosis - NeuroImage: Clinical, 23: 101938, July 2019
Deprez M, Price A, Christiaens D, Estrin Georgia L, Cordero-Grande L, Hutter J, Daducci A, Tournier JD, Rutherford M, Counsell SJ, Bach Cuadra M, Hajnal JV. Higher order spherical harmonics reconstruction of fetal diffusion MRI with intensity correction - IEEE Transactions on Medical Imaging, : 1-1, September 2019
Dunet V, Fartaria MJ, Deverdun J, Le Bars E, Maury F, Castelnovo G, Kober T, Cuadra MB, Geny C, Marechal B, de Champfleur NM.. Episodic memory decline in Parkinson’ s disease: relation with white matter hyperintense lesions and influence of quantification method. - Brain Imaging and Behavior, 13(3): 810-818, June 2019
Fartaria MJ, Sati P, Todea A, Radue EW, Rahmanzadeh R, OʼBrien K, Reich DS, Bach Cuadra M, Kober T, Granziera C. Automated Detection and Segmentation of Multiple Sclerosis Lesions Using Ultra-High-Field MP2RAGE - Investigative Radiology, 54(6): 356-364, June 2019
Pla PDA, Saxena V, Jaldén J. SpotNet – Learned iterations for cell detection in image-based immunoassays - 16th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, : 1023–1027, Venice, Italian Republic, April 2019
Donati L, Soubies E, Unser M. Inner-Loop-Free ADMM for Cryo-EM - 16th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, : , Venice, Italian Republic, April 2019
Debarre T, Fageot J, Gupta H, Unser M. Solving Continuous-Domain Problems Exactly with Multiresolution B-Splines - 44th IEEE International Conference on Acoustics, Speech, and Signal Processing, : 5122-5126, Brighton, United Kingdom, May 2019
Unser M. A Representer Theorem for Deep Neural Networks - Journal of Machine Learning Research, 20(110): 1−30, January 2019
Soubies E, Unser M. Computational Super-Sectioning for Single-Slice Structured-Illumination Microscopy - IEEE Transactions on Computational Imaging, 5(2): 240 - 250, December 2018
Debarre T, Fageot J, Gupta H, Unser M. B-Spline-Based Exact Discretization of Continuous-Domain Inverse Problems With Generalized TV Regularization - IEEE Transactions on Information Theory, 65(7): 4457 - 4470, July 2019
Soubies E, Soulez F, McCann MT, Pham T, Donati L, Debarre T, Sage D, Unser M. Pocket guide to solve inverse problems with GlobalBioIm - Inverse Problems, 35(10): 1-20, October 2019
Debarre T, Aziznejad S, Unser M. Hybrid-Spline Dictionaries for Continuous-Domain Inverse Problems - IEEE Transactions on Signal Processing, 67(22): 5824-5836, October 2019
McCann MT, Unser M. Biomedical Image Reconstruction: From the Foundations to Deep Neural Networks - Foundations and Trends® in Signal Processing, 13(3): 280-359, December 2019
Zöller D, Sandini C, Karahanoglu FI, Padula MC, Schaer M, Eliez S, Van De Ville D. Large-Scale Brain Network Dynamics Provide a Measure of Psychosis and Anxiety in 22q11.2 Deletion Syndrome - Biological Psychiatry: Cognitive Neuroscience and Neuroimaging, 4(10): 881–892, October 2019
Zoller DM, Bolton TAW, Karahanoglu FI, Eliez S, Schaer M, Van De Ville D. Robust Recovery of Temporal Overlap Between Network Activity Using Transient-Informed Spatio-Temporal Regression - IEEE Transactions on Medical Imaging, 38(1): 291-302, January 2019
Sokolov A, Granziera C, Fischi-Gomez E, Preti Maria G, Ryvlin P, Van De Ville D, Friston K. Brain network analyses in clinical neuroscience - Swiss Archives of Neurology, Psychiatry and Psychotherapy, 170: 03074, December 2019
Petrovic M, Bolton TAW, Preti MG, Liégeois R, Van De Ville D. Guided graph spectral embedding: Application to the C. elegans connectome - Network Neuroscience, 3(3): 807-826, July 2019
Quevenco FC, Schreiner SJ, Preti MG, van Bergen JMG, Kirchner T, Wyss M, Steininger SC, Gietl A, Leh SE, Buck A, Pruessmann KP, Hock C, Nitsch RM, Henning A, Van De Ville D, Unschuld PG. GABA and glutamate moderate beta-amyloid related functional connectivity in cognitively unimpaired old-aged adults - NeuroImage: Clinical, 22: 101776, 2019
Nicastro N, Wegrzyk J, Preti MG, Fleury V, Van de Ville D, Garibotto V, Burkhard PR. Classification of degenerative parkinsonism subtypes by support-vector-machine analysis and striatal 123I-FP-CIT indices - Journal of Neurology, 266(7): 1771-1781, July 2019
Preti MG, Van De Ville D. Decoupling of brain function from structure reveals regional behavioral specialization in humans - Nature Communications, 10(1): 4747, October 2019
Lordier L, Loukas S, Grouiller F, Vollenweider A, Vasung L, Meskaldij D, Lejeune F, Pittet M, Borradori-Tolsa C, Lazeyras F, Grandjean D, Van De Ville D, Hüppi P. Music processing in preterm and full-term newborns: A psychophysiological interaction (PPI) approach in neonatal fMRI - NeuroImage, 185: 857-864, January 2019
Iannotti GR, Preti MG, Grouiller F, Carboni M, De Stefano P, Pittau F, Momjian S, Carmichael D, Centono M, Seeck M, Kor CM, Schaller K, Van De Ville D, Vulliemoz S. Modulation of epileptic networks by transient interictal epileptic activity: A dynamic approach to simultaneous EEG-fMRI - NeuroImage: Clinical, 28: , 2020
Sandini C, Chambaz M, Schneider M, Armando M, Zoeller D, Schaer M, Sandi C, Van De Ville D, Eliez S. Pituitary dysmaturation affects psychopathology and neurodevelopment in 22q11.2 deletion syndrome - Psychoneuroendocrinology, 113: , March 2020
Najdenovska E, Tuleasca C, Jorge J, Maeder P, Marques J, Roine T, Gallichan D, Thiran J, Levivier M, Bach C. Comparison of MRI-based automated segmentation methods and functional neurosurgery targeting with direct visualization of the Ventro-intermediate thalamic nucleus at 7T - Scientific Reports, 9(1): 1119, February 2019
La Rosa F, Abdulkadir A, Fartaria MJ, Rahmanzadeh R, Lu PJ, Galbusera R, Barakovic M, Thiran JP, Granziera C, Bach Cuadra M. Multiple sclerosis cortical and WM lesion segmentation at 3T MRI: A deep learning method based on FLAIR and MP2RAGE - NeuroImage: Clinical, 27: 102335, 2020
del Aguila Pla P, Pellaco L, Dwivedi S, Händel P, Jaldén J. Clock synchronization over networks: Identifiability of the sawtooth model - IEEE Open Journal of Signal Processing, 1: 14-27, March 2020
Rafael-Patino J, Romascano D, Ramirez-Manzanares A, Canales-Rodríguez EJ, Gabriel G, Thiran JP. Robust Monte-Carlo Simulations in Diffusion-MRI: Effect of the substrate complexity and parameter choice on the reproducibility of results - Frontiers in Neuroinformatics, 14(8): , March 2020
Khawam M, de Dumast P, Deman P, Kebiri H, Yu T, Tourbier S, Lajous H, Hagmann P, Maeder P, Thiran JP, Meuli R, Dunet V, Bach Cuadra M, Koob M. Fetal brain biometrics: Comparison of 2D T2-weighted and 3D volumetric super-resolution magnetic resonance imaging - European Congress of Magnetic Resonance in Neuropediatrics, : , Marseilles, France, February 2020
Kebiri H, de Dumast P, Yu T, Lajous H, Thiran JP, Meuli R, Koob M, Bach Cuadra M. Automated fetal brain segmentation of 2D magnetic resonance images: Transfer learning and 3D topology correction - European Congress of Magnetic Resonance in Neuropediatrics, : , February 2020
de Dumast P, Deman P, Khawam M, Yu T, Tourbier S, Lajous H, Hagmann P, Maeder P, Thiran JP, Meuli R, Dunet V, Koob M, Bach Cuadra M. Translating fetal brain magnetic resonance image super-resolution reconstruction into the clinical environment - European Congress of Magnetic Resonance in Neuropediatrics, : , Marseilles, France, February 2020
Romascano D, Barakovic M, Patino JR, Dyrby TB, Thiran JP, Daducci A. ActiveAxADD: Toward non‐parametric and orientationally invariant axon diameter distribution mapping using PGSE - Magnetic Resonance in Medicine, 83(6): 2322-2330, January 2020
Bolton TAW, Jochaut D, Giraud AL, Van De Ville D. Brain dynamics in ASD during movie-watching show idiosyncratic functional integration and segregation - Human Brain Mapping, 39(6): 2391-404, June 2018
Rosenthal G, Vasa F, Griffa A, Hagmann P, Amico E, Goni J, Avidan G, Sporns O. Mapping higher-order relations between brain structure and function with embedded vector representations of connectomes - Nature Communications, 9(1): 2178, June 2018
Tuleasca C, Najdenovska E, Régis J, Witjas T, Girard N, Champoudry J, Faouzi M, Thiran JP, Bach Cuadra M, Levivier M, Van De Ville D. Pretherapeutic functional neuroimaging predicts tremor arrest after thalamotomy - Acta Neurologica Scandinavica, 137(5): 500-508, May 2018
Tuleasca C, Régis J, Najdenovska E, Witjas T, Girard N, Champoudry J, Faouzi M, Thiran JP, Bach Cuadra M, Levivier M, Van De Ville D. Pretherapeutic Functional Imaging Allows Prediction of Head Tremor Arrest After Thalamotomy for Essential Tremor: The Role of Altered Interconnectivity Between Thalamolimbic and Supplementary Motor Circuits - World Neurosurgery, 112: e479-e488, April 2018