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Unser M, Sage D, Van De Ville D. Multiresolution Monogenic Signal Analysis Using the Riesz-Laplace Wavelet Transform - IEEE Transactions on Image Processing, 18(11): 2402 - 2418, November 2009
Schaer M, Glaser B, Bach Cuadra M, Debbane M, Thiran JP, Eliez S. Congenital heart disease affects local gyrification in 22q11.2 deletion syndrome - Developmental Medicine and Child Neurology, 51(9): 746-53, September 2009
Raabe A, Van De Ville D, Leutenegger M, Szelényi A, Hattingen E, Gerlach R, Seifert V, Hauger C, Lopez A, Leitgeb R, Unser M, Martin-Williams EJ, Lasser T. Laser Doppler imaging for intraoperative human brain mapping - NeuroImage, 44(4): 1284-9, February 2009
Martin-Fernandez M, Munoz-Moreno E, Cammoun L, Thiran JP, Westin CF, Alberola-Lopez C. Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data - Medical Image Analysis, 13(1): 19-35, February 2009
Kandaswamy D, Blu T, Van de Ville D. Analytic Sensing: Noniterative Retrieval Of Point Sources From Boundary Measurements - SIAM Journal on Scientific Computing, 31(4): 3179-3194, January 2009
Honey CJ, Sporns O, Cammoun L, Gigandet X, Thiran JP, Meuli R, Hagmann P. Predicting human resting-state functional connectivity from structural connectivity - Proceedings of the National Academy of Sciences, 106(6): 2035-40, February 2009
Gorthi S, Duay V, Houhou N, Bach Cuadra M, Schick U, Becker M, Allal A, Thiran J. Segmentation of Head and Neck Lymph Node Regions for Radiotherapy Planning Using Active Contour-Based Atlas Registration - IEEE Journal of Selected Topics in Signal Processing, 3(1): 135-47, February 2009
Cardenes R, de Luis-Garcia R, Bach Cuadra M. A multidimensional segmentation evaluation for medical image data - Computer Methods and Programs in Biomedicine, 96(2): 108-24, November 2009
Binzoni T, Leung TS, Van De Ville D. The photo-electric current in laser-Doppler flowmetry by Monte Carlo simulations - Physics in Medicine and Biology, 54(14): 303-18, July 2009
Verhaeghe J, Van De Ville D, Khalidov I, D'Asseler Y, Lemahieu I, Unser M. Dynamic PET reconstruction using wavelet regularization with adapted basis functions - IEEE Transactions on Medical Imaging, 27(7): 943 - 959, July 2008
Van De Ville D, Unser M. False Discovery Rate for Wavelet-Based Statistical Parametric Mapping - IEEE Journal of Selected Topics in Signal Processing, 2(6): 897 - 906, December 2008
Van De Ville D, Unser M. Complex Wavelet Bases, Steerability, and the Marr-Like Pyramid - IEEE Transactions on Image Processing, 17(11): 2063 - 2080, November 2008
Unser M, Van De Ville D. The Pairing of a Wavelet Basis With a Mildly Redundant Analysis via Subband Regression - IEEE transactions on Image Processing, 17(11): 2040-52, November 2008
Tsukahara M, Mitrovic S, Gajdosik V, Margaritondo G, Pournin L, Ramaioli M, Sage D, Hwu Y, Unser M, Liebling TM. Coupled tomography and distinct-element-method approach to exploring the granular media microstructure in a jamming hourglass - Physical review E: Statistical, nonlinear, and soft matter physics, 77(6): , June 2008
Schaer M, Cuadra MB, Tamarit L, Lazeyras F, Eliez S, Thiran JP. A surface-based approach to quantify local cortical gyrification - IEEE Transactions on Medical Imaging, 27(2): 161-70, February 2008
Luisier F, Blu T. SURE-LET multichannel image denoising: Interscale orthonormal wavelet thresholding - IEEE Transactions on Image Processing, 17(4): 482 - 492, April 2008
Gigandet X, Hagmann P, Kurant M, Cammoun L, Meuli R, Thiran JP. Estimating the confidence level of white matter connections obtained with MRI tractography - PLOS One, 3(12): e4006, December 2008
Entezari A, Van De Ville D, Moller T. Practical box splines for reconstruction on the body centered cubic lattice - IEEE Transactions on Visualization and Computer Graphics, 14(2): 313-28, March 2008
Binzoni T, Van De Ville D. Full-field laser-Doppler imaging and its physiological significance for tissue blood perfusion - Physics in Medicine and Biology, 53(23): 6673-94, December 2008
Barbotin Y, Van De Ville D, Blu T, Unser M. Fast Computation of Polyharmonic B-Spline Autocorrelation Filters - IEEE Signal Processing Letters, 15: 773 - 776, November 2008
Van De Ville D, Seghier ML, Lazeyras F, Blu T, Unser M. WSPM: Wavelet-based statistical parametric mapping - NeuroImage, 37(4): 1205-17, October 2007
Thevenaz P, Unser M. User-friendly semiautomated assembly of accurate image mosaics in microscopy - Microscopy Research and Technique, 70(2): 135-46, February 2007
Luisier F, Blu T, Unser M. A new SURE approach to image denoising: Interscale orthonormal wavelet thresholding - IEEE Transactions on Image Processing, 16(3): 593 - 606, March 2007
Khalidov I, Van de Ville D, Jacob M, Lazeyras F, Unser M. BSLIM: Spectral localization by imaging with explicit B-0 field inhomogeneity compensation - IEEE Transactions on Medical Imaging, 26(7): 990-1000, July 2007
Jonasson L, Hagmann P, Pollo C, Bresson X, Richero Wilson C, Meuli R, Thiran JP. A level set method for segmentation of the thalamus and its nuclei in DT-MRI - Signal Processing, 87(2): 309-321, February 2007
Hagmann P1, Kurant M, Gigandet X, Thiran P, Wedeen VJ, Meuli R, Thiran JP. Mapping human whole-brain structural networks with diffusion MRI - PLOS One, 2(7): e597, July 2007
Condat L, Van De Ville D. Quasi-interpolating spline models for hexagonally-sampled data - IEEE Transactions on Image Processing, 16(5): 1195-206, June 2007
Blu T, Luisier F. The SURE-LET approach to image denoising - IEEE Transactions on Image Processing, 16(11): 2778 - 2786, November 2007
Bathellier B, De Ville DV, Blu T, Unser M, Carleton A. Wavelet-based multi-resolution statistics for optical imaging signals: Application to automated detection of odour activated glomeruli in the mouse olfactory bulb - NeuroImage, 34(3): 1020-35, February 2007
Hagmann P, Jonasson L, Deffieux T, Meuli R, Thiran JP, Wedeen VJ. Fibertract segmentation in position orientation space from high angular resolution diffusion MRI - NeuroImage, 32(2): 665-75, August 2006
Liverani MC, Freitas L, Siredi V, Mikneviciute G, Martuzzi R, Meskaldji DE, Borradori Tolsa C, Leuchter R, Schnider A, Van De Ville D, Huppi P. Get real: Orbitofrontal cortex mediates the ability to sense reality in early adolescents - Journal of Neurosurgery, 10(4): , April 2020
Hagmann P, Cammoun L, Martuzzi R, Maeder P, Clarke S, Thiran JP, Meuli R.. Hand preference and sex shape the architecture of language networks - Human Brain Mapping, 27(10): 828-35, October 2006
Cuadra MB, De Craene M, Duay V, Macq B, Pollo C, Thiran JP. Dense deformation field estimation for atlas-based segmentation of pathological MR brain images - Computer Methods and Programs in Biomedicine, 84(2-3): 66-75, December 2006
Castro FJ, Pollo C, Meuli R, Maeder P, Cuisenaire O, Cuadra MB, Villemure JG, Thiran JP.. A cross validation study of deep brain stimulation targeting: From experts to atlas-based, segmentation-based and automatic registration algorithms - IEEE Transactions on Medical Imaging, 25(11): 1440-50, November 2006
Custo A, Vulliemoz S, Grouiller F, Van De Ville D, Michel C. EEG source imaging of brain states using spatiotemporal regression - NeuroImage, 96(1): 106-16, August 2014
Bozorgtabar B, Mahapatra Q, Thiran JP. ExprADA: Adversarial Domain Adaptation for facial expression analysis - Pattern Recognition, 100(107111): , April 2020
Van de Ville D, Britz J, Michel CM. EEG microstate sequences in healthy humans at rest reveal scale-free dynamics - Proceedings of the National Academy of Sciences, 107(42): 18179-84, October 2010
Martuzzi R, Murray MM, Meuli RA, Thiran JP, Maeder PP, Michel CM. Methods for determining frequency- and region-dependent relationships between estimated LFPs and BOLD responses in humans - Journal of Neurophysiology, 101(1): 491-502, January 2009
Abdollahi Aghdam O, Bozorgtabar B, Ekenel HK, Thiran JP. Exploring factors for improving low resolution face recognition - IEEE Conference on Computer Vision and Pattern Recognition Workshops, : , Long Beach, CA, USA, July 2019
Rad MS, Bozorgtabar B, Marti UV, Basler M, Ekenel HK, Thiran JP. SROBB: Targeted perceptual loss for single image super-resolution - International Conference on Computer Vision (ICCV 2019), : , Seoul, Korea, November 2019
Bozorgtabar B, Rad MS, Mahapatra D, Thiran JP. SynDeMo: Synergistic deep feature alignment for joint learning of depth and ego-motion - 2019 IEEE/CVF International Conference on Computer Vision (ICCV), : , Seoul, Korea, November 2019
Perdios D, Besson A, Martinez F, Vonlanthen M, Arditi M, Thiran JP. On problem formulation, efficient modeling and deep neural networks for high-quality ultrasound imaging: Invited presentation - 2019 53rd Annual Conference on Information Sciences and Systems (CISS), : , Baltimore, MD, USA, March 2019
Pizzolato M, Yu T, Canales-Rodrı́guez EJ, Thiran JP. Robust T2 relaxometry with hamiltonian MCMC for myelin water fraction estimation - 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), : , Venice, Italy, April 2019
Pizzolato M, Deriche R, Canales-Rodríguez EJ, Thiran JP. Spatially varying Monte Carlo sure for the regularization of biomedical emages - 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), : , Venice, Italy, April 2019
Ocampo-Pineda M, Schiavi S, Frigo M, Barakovic M, Girard G, Descoteaux M, Thiran JP, Daducci A. Reducing false-positive connections using hierarchical microstructure-informed tractography - International Society for Magnetic Resonance in Medicine (ISMRM) 27th Annual Meeting & Exhibition, : , Montréal, Canada, May 2019
Barakovic M, Leuze C, Crow A, Tian Q, Daducci A, Thiran JP, Deisseroth K, McNab J. Comparing fiber orientation estimates from CLARITY and Diffusion MRI in macaque visual cortex - International Society for Magnetic Resonance in Medicine (ISMRM) 27th Annual Meeting & Exhibition, : , Montréal, Canada, May 2019
Albrici T, Fasounaki M, Bagher Salimi S, Vray G, Bozorgtabar B, Ekenel HK, Thiran JP. G2-VER: Geometry Guided Model Ensemble for Video-based Facial Expression Recognition - 2019 14th IEEE International Conference on Automatic Face & Gesture Recognition (FG 2019), : , Lille, France, May 2019
Yu T, Pizzolato M, Girard G, Rafael-Patino J, Canales-Rodríguez EJ, Thiran JP. Robust Biophysical Parameter Estimation with a Neural Network Enhanced Hamiltonian Markov Chain Monte Carlo Sampler - International Conference on Information Processing in Medical Imaging (IPMI), : 818-829, Hong Kong, June 2019
Rafael-Patino J, Barakovic M, Girard G, Daducci A, Thiran JP. Learning Global Brain Microstructure Maps Using Trainable Sparse Encoders - 2019 IEEE International Conference on Image Processing (ICIP), : , Taipei, Taiwan, September 2019
Besson A, Perdios D, Wiaux Y, Thiran JP. Joint Sparsity with Partially Known Support and Application to Ultrasound Imaging - IEEE Signal Processing Letters, 26(1): 84 - 88, November 2018
Canales-Rodríguez EJ, Haitz Legarreta J, Pizzolato M, Rensonnet G, Girard G, Patino J, Barakovic M, Romascano D, Alemán-Gómez Y, Radua J, Pomarol-Clotet E, Salvador R, Thiran JP, Daducci A. Sparse wars: A survey and comparative study of spherical deconvolution algorithms for diffusion MRI - NeuroImage, 184: 140-160, January 2019
Rensonnet G, Scherrer B, Girard G, Jankovski A, Warfield SK, Macq B, Thiran JP, Taquet M. Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations - NeuroImage, 184: 964-980, January 2019
Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Patino JR, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez E, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. Limits to anatomical accuracy of diffusion tractography using modern approaches - NeuroImage, 185: 1-11, January 2019
Innocenti GM, Dyrby TB, Girard G, St-Onge E, Thiran JP, Daducci A, Descoteaux M. Topological principles and developmental algorithms might refine diffusion tractography - Brain Structure and Function, 224(1): 1-8, January 2019
Besson A, Roquette L, Perdios D, Simeoni M, Arditi M, Hurley P, Wiaux Y, Thiran JP. A Physical Model of Non-stationary Blur in Ultrasound Imaging - IEEE Transactions on Computational Imaging, 5(3): 381 - 394, September 2019