Publications
Hajdu SD, Kaesmacher J, Michel PP, Sirimarco G, Knebel JF, Bartolini B, Kurmann CC, Puccinelli F, Mosimann PJ, Bonvin C, Arnold PM, Niederhäuser J, Eskandari A, Mordasini P, Gralla PJ, Fischer PU, Saliou PG. Association of time of day when endovascular therapy for stroke starts and functional outcome - Neurology, 96(8): e1124-e1136, February 2021
Spahr A, Bozorgtabar B, Thiran JP. Self-taught semi-supervised anomaly detection on upper limb X-rays - 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), : 1632-1636, Nice, France, April 2021
Barakovic M, Tax C, Rudrapatna U, Chamberland M, Rafael-Patino J, Granziera C, Thiran JP, Daducci A, Canales-Rodríguez EJ, Jones DK. Resolving bundle-specific intra-axonal T2 values within a voxel using diffusion-relaxation tract-based estimation - NeuroImage, 227(117617): , February 2021
Tomar D, Lortkipanidze M, Vray G, Bozorgtabar B, and Thiran JP. Self-attentive spatial adaptive normalization for cross-modality domain adaptation - IEEE Transactions on Medical Imaging, 40(10): 2926-2938, February 2021
Turoman N, Tivadar RI, Retsa C, Maillard AM, Scerif G, Matusz PJ. The development of attentional control mechanisms in multisensory environments - Developmental Cognitive Neuroscience, 43(2021): 100930, January 2021
Squair JW, Gautier M, Mahe L, Soriano JE, Rowald A, Bichat A, Cho N, Anderson MA, James ND, Gandar J, Incognito AV, Schiavone G, Sarafis ZK, Laskaratos A, Bartholdi K, Demesmaeker R, Komi S, Moerman C, Vaseghi B, Scott B, Rosentreter R, Kathe C, Ravier J, McCracken L, Kang X, Vachicouras N , Falleger F, Jelescu I, YunLong C, Li Q, Buschman R, Buse N, Denison T, Dukelow S, Charbonneau R, Rigby I, Boyd S, Millar P, Moraud EM, Capogrosso M, Wagner F, Barraud Q, Bezard E, Lacour S, Bloch J, Phillips A, Courtine G. Neuroprosthetic baroreflex controls haemodynamics after spinal cord injury - Nature, 590: 308–314, January 2021
Rackayová V, Flatt E, Braissant O, Grosse J, Capobianco D, Mastromarino P, McMillin M, DeMorrow S, McLin VA, Cudalbu C. Probiotics improve the neurometabolic profile of rats with chronic cholestatic liver disease - Scientific Reports, 11: , January 2021
Darçot E, Yerly J, Hilbert T, Colotti R, Najdenovska E, Kober T, Stuber M, van Heeswijk R. Compressed sensing with signal averaging for improved sensitivity and motion artifact reduction in fluorine-19 MRI - NMR in Biomedicine, 34(1): e4418, January 2021
Sa de Almeida J, Meskaldji DE, Loukas S, Lordier L, Gui L, Lazeyras F, Hüppi PS. Preterm birth leads to impaired rich-club organization and fronto-paralimbic/limbic structural connectivity in newborns - NeuroImage, 225: , January 2021
Ros T, Kwiek J, Andriot T, Michela A, Vuilleumier P, Garibotto V, Ginovart N. PET imaging of dopamine neurotransmission during EEG neurofeedback - Frontiers in Physiology, : , January 2021
Tristão Pereira C, Diao Y, Yin T, da Silva A, Lanz B, Pierzchala K, Poitry-Yamate C, Jelescu I. Synchronous nonmonotonic changes in functional connectivity and white matter integrity in a rat model of sporadic Alzheimer’s disease - NeuroImage, 225: , January 2021
Khazaal Y, Elowe J, Kloucek P, Preisig M, Tadri M, Vandeleur C, Vandenberghe F, Verloo H, Ros T, Von Guntenb A. Psychiatrie - Revue Médicale Suisse, 17(85): 9, January 2021
Lin A, Andronesi O, Bogner W, Choi IY, Coello E, Cudalbu C, Juchem C, Kemp GJ, Kreis R, Krššák R, Lee P, Maudsley AA, Meyerspeer M, Mlynarik V, Near J, Öz G, Peek AL, Puts NA, Ratai EM, Tkácˇ I, Mullins PG. Minimum reporting standards for in vivo magnetic resonance spectroscopy (MRSinMRS): Experts’ consensus recommendations - NMR in Biomedicine, 34: e4484, January 2021
Duran-Trio L, Fernandes-Pires G, Simicic D, Grosse J, Roux-Petronelli C, Bruce SJ, Binz PA, Sandi C, Cudalbu C, Braissant O. A new rat model of creatine transporter deficiency reveals behavioral disorder and altered brain metabolism - Scientific Reports, 11: , January 2021
Öz G, Deelchand DK, Wijnen JP, Mlynárik V, Xin L, Mekle R, Noeske R, Scheenen TWJ, Tkáč I. Advanced single voxel 1 H magnetic resonance spectroscopy techniques in humans: Experts’ consensus recommendations - NMR in Biomedicine, 34: e4236, January 2021
Račkayová V, Simicic D, Donati G, Braissant O, Gruetter R, McLin VA, Cudalbu C. Late post-natal neurometabolic development in healthy male rats using 1 H and 31 P Magnetic Resonance Spectroscopy - Journal of Neurochemistry, : , January 2021
Franceschiello B, Sart A, Citti G. A neuro-mathematical model for size and context related illusions. Space-time geometries for motion and perception in the brain and the arts - Lecture Notes in Morphogenesis, : 91-113, January 2021
Gauthier B, Brechet L, Lance F, Mange R, Herbelin B, Faivre N, Bolton TAW, Van De Ville D, Blanke O. First-person body view modulates the neural substrates of episodic memory and autonoetic consciousness: A functional connectivity study - NeuroImage, 223: , December 2020
Lu PJ, Yoo Y, Rahmanzadeh R, Galbusera R, Weigel M, Ceccaldi P, Nguyen TD, Spincemaille P, Wang Y, Daducci A, La Rosa F, Bach Cuadra M, Sandkühler R, Nael K, Doshi A, Fayad ZA, Kuhle J, Kappos L, Granziera C. GAMER MRI: Gated-attention mechanism ranking of multi-contrast MRI in brain pathology - NeuroImage Clinical, 29(102522): , December 2020
Cuenoud B, Ipek O, Shevlyakova M, Beaumont M, Cunnane S, Gruetter R, Xin L. Brain NAD is associated with ATP energy production and membrane phospholipid turnover in humans - Frontiers in Aging Neuroscience, 12: 609517, December 2020
Bois F, Noirot C, Dietemann S, Mainta IC, Zilli T, Garibotto V, and Walter MA. [68Ga]Ga-PSMA-11 in prostate cancer: a comprehensive review - American Journal of Nuclear Medicine and Molecular Imaging, 10(6): 349-374, December 2020
Darçot E, Delacoste J, Dunet V, Dournes G, Rotzinger D, Bernasconi M, Vremaroiu P, Simons J, Long O, Rohner C, Ledoux JB, Stuber M, Lovis A, Beigelman-Aubry C. Lung MRI assessment with high-frequency noninvasive ventilation at 3 T - Magnetic Resonance Imaging, 74: 64-73, December 2020
Pievani M, Jelescu IO, Jorge J, Reynaud O, Andryszak P, Garibotto V, Jovicich J, Frisoni G. In-vivo imaging of locus coeruleus integrity at ultra-high field: A feasibility study - Alzheimer's & Dementia, 16(4): , December 2020
Vorderwülbecke BJ, Carboni M, Tourbier S, Brunet D, Seeber M, Spinelli L, Seeck M, Vulliemoz S. High-density electric source imaging of interictal epileptic discharges: How many electrodes and which time point? - Clinical Neurophysiology, 131(12): 2795-2803, December 2020
Cudalbu C, Behar KL, Bhattacharyya PK, Bogner W, Borbath T, de Graaf RA, Gruetter R, Henning A, Juchem C, Kreis R, Lee P, Lei H, Marjańska M, Mekle R, Murali-Manohar S, Považan M, Rackayová V, Simicic D, Slotboom J, Soher BJ, Starčuk Z Jr, Starčuková J, Tkáč I, Williams S, Wilson M, Wright AM, Xin L, Mlynárik V. Contribution of macromolecules to brain 1 H MR spectra: Experts’ consensus recommendations - NMR in Biomedicine, : e4393, November 2020
Bohra P, Campos J, Gupta H, Aziznejad S, Unser M. Learning activation functions in deep (spline) neural networks - IEEE Open Journal of Signal Processing, 1: 295 - 309, November 2020
Ma LE, Yerly J, Piccini D, Di Sopra L, Roy CW, Carr JC, Rigsby C, Kim D, Stuber M, Markl M. 5D Flow MRI: A fully self-gated, Free-running Framework for cardiac and respiratory motion-resolved 3D hemodynamics - Radiology Cardiothoracic Imaging, 2(6): e200219, November 2020
Girard G, Caminiti R, Battaglia-Mayer A, St-Onge E, Ambrosen KS, Eskildsen SF, Krug K, Dyrby TB, Descoteaux M, Thiran JP, Innocenti GM. On the cortical connectivity in the macaque brain: A comparison of diffusion tractography and histological tracing data - NeuroImage, 221: 1, November 2020
Mahapatra D, Bozorgtabar B, Thiran JP, Shao L. Structure preserving stain normalization of histopathology images using self supervised semantic guidance - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : 309-319, Lima, Peru, October 2020
Ge Y, Antiochos P, Steel K, Bingham S, Abdullah S, Chen Y-Y, Mikolich JR, Arai A, Bandettini P, Shanbhag S, Patel A, Farzaneh-Far A, Heitner J, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R. Prognostic value of stress CMR perfusion imaging in patients with reduced left ventricular function - JACC Cardiovascular Imaging, 13(10): 2132–2145, October 2020
Abbet C, Zlobec I, Bozorgtabar B, Thiran JP. Divide-and-rule: self-supervised learning for survival analysis in colorectal cancer - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : 480-489, Lima, Peru, October 2020
Bozorgtabar B, Mahapatra D, Vray G, Thiran JP. SALAD: self-supervised aggregation learning for anomaly detection on X-Rays - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : 468-478, Lima, Peru, October 2020
Bréchet L, Brunet D, Perogamvros L, Tononi G, Michel CM. EEG microstates of dreams - Scientific Reports, 10(1): 17069, October 2020
Rensonnet G, Rafael-Patino J, Macq B, Thiran JP, Pizzolato M, Girard G. A Signal Peak Separation Index for axisymmetric B-tensor encoding - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI 2020 International Workshop on Computational Diffusion MRI, : , Lima, Peru, October 2020
Jelescu IO, Palombo M, Bagnato F, Schilling K. Challenges for biophysical modeling of microstructure - Journal of Neuroscience Methods, 344: 108861, October 2020
Lorton O, Guillemin P, Holman R, Desgranges S, Gui L, Crowe LA, Terraz S, Nastasi A, Lazeyras F, Contino-Pépin C, Salomir R. Enhancement of HIFU thermal therapy in perfused tissue models using micron-sized FTAC-stabilized PFOB-core endovascular sonosensitizer - International Journal of Hyperthermia, 37(1): 116-1130, September 2020
Skupienski R, Do KQ, Xin L. In vivo 31P magnetic resonance spectroscopy study of mouse cerebral NAD content and redox state during neurodevelopment - Scientific Reports, 10: 15623, September 2020
Truffet R, Rafael-Patino J, Girard G, Pizzolato M, Barillo C, Thiran JP, Caruyer E. An evolutionary framework for microstructure-sensitive generalized diffusion gradient waveforms - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : 94-103, Lima, Peru, October 2020
Pernet C, Garrido MI, Gramfort A, Maurits N, Michel CM, Pang E, Salmelin R, Schoffelen JM, Valdes-Sosa PA, Puce A. Issues and recommendations from the OHBM COBIDAS MEEG committee for reproducible EEG and MEG research - Nature Neuroscience, 23: 1473–1483, September 2020
Todea RA, Lu PJ, Fartaria de Oliveira MJ, Bonnier G, Du Pasquier R, Krueger G, Bach Cuadra M, Psychogios MN, Kappos L, Kuhle J, Granziera C. Evolution of cortical and white matter lesion load in early-stage multiple sclerosis: correlation with neuroaxonal damage and clinical changes - Frontiers in Neurology, 11(973): , September 2020
Barquero G, La Rosa F, Kebiri H, Lu P-J, Rahmanzadeh R, Weigel M, Fartaria M J, Kober T, Théaudin M, Du Pasquier R, Sati P, Reich DS, Absinta M, Granziera C, Maggi P, Bach Cuadra M. RimNet: A deep 3D multimodal MRI architecture for paramagnetic rim lesion assessment in multiple sclerosis - NeuroImage: Clinical, 28(102412): , September 2020
Masala N, Bastiaansen JAM, Di Sopra L, Roy CW, Piccini D, Yerly J, Colotti R, Stuber M. Free-running 5D coronary MR angiography at 1.5T using LIBRE water excitation pulses - Magnetic Resonance in Medicine, 84(3): 1470-1485, September 2020
Longchamp A, Klauser A, Songeon J, Agius T, Nastasi A, Ruttiman R, Moll S, Meier RPH, Buhler L, Corpataux JM, Lazeyras F. Ex vivo analysis of kidney graft viability using 31P magnetic resonance imaging spectroscopy - Transplantation, 104(9): 1825-1831, September 2020
Gaglianese A, Branco MP, Groen I, Vansteensel MJ, Murray MM, Petridou N, Ramsey NF. Electrocorticography evidence of tactile motion responses in visual cortices - Brain Topography, 33(5): 559-570, September 2020
Maitre NL, Key AF, Slaughter JC, Yoder PJ, Neel ML, Richard C, Wallace MT, Murray MM. Neonatal multisensory processing in preterm and term infants predicts sensory reactivity and internalizing tendencies in early childhood - Brain Topography, 33(5): 586-599, September 2020
Mirian C, Duun-Henriksen AK, Maier A, Møller Pedersen M, Rehné Jensen L, Bashir A, Graillon T, Hrachova M, Bota D, van Essen M, Spanjol P, Kreis C, Law I, Broholm H, Poulsgaard L, Fugleholm K, Ziebell M, Munch T, Walter MA, and Mathiesen T. Somatostatin receptor-targeted radiopeptide therapy in treatment-refractory meningioma: an individual patient data meta-analysis - Journal of Nuclear Medicine, : , August 2020
Lanz B, Abaei A, Braissant O, Choi IY, Cudalbu C, Henry PG, Gruetter R, Kara F, Kantarci K, Lee P, Lutz N, Marjańska M, Mlynárik V, Rasche V, Xin L, Valette J. Magnetic resonance spectroscopy in the rodent brain: Experts’ consensus recommendations - NMR in Biomedicine, : e4325, August 2020
Antiochos P, Ge Y, Steel K, Bingham S, Abdullah S, Mikolich JR, Arai AE, Bandettini P, Patel A, Farzaneh-Far A, Heitner JF, Shenoy C, Leung S, Gonzalez J, Shah D, Raman S, Ferrari V, Schulz-Menger J, Stuber M, Simonetti O, Kwong R, SPINS Study Investigators. Imaging of clinically unrecognized myocardial fibrosis in patients with suspected coronary artery disease - Journal of the American College of Cardiology, 76(8): 945-957, August 2020
Pellegrin M, Bouzourène K, Aubert JF, Bielmann C, Gruetter R, Rosenblatt‑Velin N, Poitry‑Yamate C, Mazzolai L. Impact of aerobic exercise type on blood flow, muscle energy metabolism, and mitochondrial biogenesis in experimental lower extremity artery disease - Scientific Reports, 10(14048): , August 2020
Kreis R, Boer V, Choi IY, Cudalbu C, de Graaf RA, Gasparovic C, Heerschap A, Krššák M, Lanz B, Maudsley AA, Meyerspeer M, Near J, Öz G, Posse S, Slotboom J, Terpstra M, Tkáč I, Wilson M, Bogner W. Terminology and concepts for the characterization of in vivo MR spectroscopy methods and MR spectra: Background and experts’ consensus recommendations - NMR in Biomedicine, : , August 2020
La Rosa F, Beck ES, Abdulkadir A, Thiran JP, Reich DS, Sati P, Bach Cuadra M. Automated detection of cortical lesions in multiple sclerosis patients with 7T MRI - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, : , Lima, Peru, October 2020
Cantonas LM, Mancini V, Rihs TA, Rochas V, Schneider M, Eliez S, Michel CM. Abnormal auditory processing and underlying structural changes in 22q11.2 deletion syndrome - Schizophrenia Bulletin, 47(1): 189–196, August 2020
Maitre NL, Jeanvoine A, Yoder PJ, Key AP, Slaughter JC, Carey H, Needham A, Murray MM, Heathcock H, and the BBOP group. Kinematic and somatosensory gains in infants with cerebral palsy after a multi-component upper-extremity intervention: A randomized controlled trial - Brain Topography, 33: 751–766, December 2020
Strasser A, Luksys G, Xin L, Pessiglione M, Gruetter R, Sandi C. Glutamine-to-glutamate ratio in the nucleus accumbens predicts effort-based motivated performance in humans - Neuropsychopharmacology, 45(12): 2048–2057, November 2020
Lajous H, Hilbert T, Roy CW, Tourbier S, de Dumast P, Yu T, Thiran JP, Ledoux JB, Piccini D, Hagmann P, Meuli R, Kober T, Stuber M, van Heeswijk RB, Bach Cuadra M. T2 mapping from super-resolution-reconstructed clinical fast spin echo magnetic resonance acquisitions - International Conference on Medical Image Computing and Computer-Assisted Intervention-MICCAI, 12262: 114-124, Lima, Peru, October 2020