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Goujon A., Neumayer S., Unser M.. Learning Weakly Convex Regularizers for Convergent Image-Reconstruction Algorithms - SIAM Journal on Imaging Sciences, 17(1): 91–115, 18 January 2024
Canales‐Rodríguez E.J., Pizzolato M., Zhou F.-L., Barakovic M., Thiran J.-P., Jones D. K., Parker G. J. M., Dyrby T.B.. Pore size estimation in axon-mimicking microfibers with diffusion-relaxation MRI - Magnetic Resonance in Medicine, 91(6): 2579-2596, 08 January 2024
Viñals R., Thiran J.-P.. A KL Divergence-Based Loss for In Vivo Ultrafast Ultrasound Image Enhancement with Deep Learning - Journal of Imaging, 9(12): 256, 23 November 2023
Morgenroth E., Vilaclara L., Muszynski M., Gaviria J., Vuilleumier P., Van De Ville D.. Probing neurodynamics of experienced emotions—a Hitchhiker’s guide to film fMRI - Social Cognitive and Affective Neuroscience, 18(nsad063): , 01 November 2023
Ravano V., Piredda G.F., Krasensky J., Andelova M., Uher T., Srpova B., Kubala Havrdova E., Vodehnalova K., Horakova D., Nytrova P., Disselhorst J. A., Hilbert T., Maréchal B., Thiran J.-P., Kober T., Richiardi J., Vaneckova M.. Tract-wise microstructural analysis informs on current and future disability in early multiple sclerosis - Journal of Neurology, 271(2): 631-641, 11 October 2023
Chowdhury R., Wan J., Gardier R., Rafael-Patino J., Thiran J.-P., Gibou F., Mukherjee A.. Molecular Imaging with Aquaporin-Based Reporter Genes: Quantitative Considerations from Monte Carlo Diffusion Simulations - ACS Synthetic Biology, 12(10): 3041–3049, 4 October 2023
Ravano V., Sommer S., Piredda G. F., Krasensky J., Andelova M., Kudrna M., Uher T., Disselhorst J., Marechal B., Thiran J.-Ph., Hilbert T., Richiardi J., Vaneckova M., Kober T.. Perilesional tissue exhibits different T1 gradients depending on multiple sclerosis subtypes - 9th Joint ECTRIMS-ACTRIMS meeting, : , Milan, Italy, 13 October 2023
Kebiri H., Gholipour A., Lin R., Vasung L., Karimi D., Bach Cuadra M.. Robust Estimation of the Microstructure of the Early Developing Brain Using Deep Learning - MICCAI, : , Vancouver, Canada, October 2023
de Dumast P., Sanchez T., Lajous H., Bach Cuadra M. Demander à ChatGPT. Simulation-Based Parameter Optimization for Fetal Brain MRI Super-Resolution Reconstruction - MICCAI, : , Vancouver, Canada, October 2023
Filippa M., Fischi-Gomez E., Jorge J., Grimaldi V., Lemay M., Thiran J.-P., Lissek H., Hüppi P.. Music and voice interventions in the NICU: a novel adaptive personalized auditory care based on biophysical feedback - Proceedings of the 10th Convention of the European Acoustics Association Forum Acusticum 2023, : , Torino, Italy, 15 September 2023
Leserri S., Segura-Amil A., Nowacki A., Debove I., Petermann K., Schäppi L., Preti M. G., Van De Ville D., Pollo C., Walther S., Nguyen T. A. K.. Linking connectivity of deep brain stimulation of nucleus accumbens area with clinical depression improvements: a retrospective longitudinal case series - European Archives of Psychiatry and Clinical Neuroscience, 274(3): 685–696, 05 September 2023
Viñals R., Beuret S., Thiran J.-P.. Quality Enhancement of Ultrafast Ultrasound Images with Deep Networks and Transfer Learning - 2023 IEEE International Ultrasonics Symposium (IUS), : , Montreal, September 2023
Heriard-Dubreuil B., Besson A., Cohen-Bacrie C., Thiran J. -P.. Interpolation-Based Regularization for Speed of Sound Estimation in Layered Media - 2023 IEEE International Ultrasonics Symposium (IUS), : , Montreal, September 2023
Heriard-Dubreuil B., Besson A., Cohen-Bacrie C., Thiran J.-P.. An Angular Framework for the Separation of Single and Multiple Scattering - 2023 IEEE International Ultrasonics Symposium (IUS), : , Montreal, September 2023
Adda J., Bioley G., Van De Ville D., Cudalbu C., Preti M. G., Gninenko N.. Automated segmentation and labeling of subcutaneous mouse implants at 14.1T - Frontiers in Signal Processing, 3: , 21 August 2023
Barakovic M., Pizzolato M., Tax C. M. W., Rudrapatna U., Magon S., Dyrby T. B., Granziera C., Thiran J.-P., Jones D. K., Canales-Rodríguez E.J.. Estimating axon radius using diffusion-relaxation MRI: calibrating a surface-based relaxation model with histology - Frontiers in Neuroscience, 17: , 11 August 2023
Villarreal-Haro J. L., Gardier R., Canales-Rodríguez E .J., Fischi-Gomez E., Girard G., Thiran J.-P., Rafael-Patiño J.. CACTUS: a computational framework for generating realistic white matter microstructure substrates - Frontiers in Neuroinformatics, 17: , 01 August 2023
Siffredi V., Liverani M. C., Borradori-Tolsa C., Hà-Vinh Leuchter R., Thiran J.-P., Hüppi P. S., Fischi-Gómez E.. Cortical alterations after very preterm birth and the association with socio-emotional abilities from childhood to early adolescence - Cerebral Cortex, 33(14): 9117-9129, 15 July 2023
Windel F., Gardier R., Fourchard G., Viñals R., Bavelier D., Padberg F. J., Rancans E., Bonne O., Nahum M., Thiran J.-P., Morishita T., Hummel F. C.. Computer vision-based algorithm to sUppoRt coRrect electrode placemeNT (CURRENT) for home-based electric non-invasive brain stimulation - Clinical Neurophysiology, 153: 57-67, 14 July 2023
Beuret S., Thiran J.-P.. Windowed Radon Transform and Tensor Rank-1 Decomposition for Adaptive Beamforming in Ultrafast Ultrasound - IEEE Transactions on Medical Imaging, 43(1): 135-148, 14 July 2023
Girard G., Rafael-Patiño J., Truffet R., Aydogan D. B., Adluru N., Nair V. A., Prabhakaran V., Bendlin B. B., Alexander A. L., Bosticardo S., Gabusi I., Ocampo-Pineda M., Battocchio M., Piskorova Z., Bontempi P., Schiavi S., Daducci A., Stafiej A., Ciupek D., Bogusz F., Pieciak T., Frigo M., Sedlar S., Deslauriers-Gauthier S., Kojčić I., Zucchelli M., Laghrissi H., Ji Y., Deriche R., Schilling K. G., Landman B. A., Cacciola A., Basile G. A., Bertino S., Newlin N., Kanakaraj P., Rheault F., Filipiak P., Shepherd T. M., Lin Y.-C., Placantonakis D. G., Boada F. E., Baete S. H., Hernández-Gutiérrez E., Ramírez-Manzanares A., Coronado-Leija R., Stack-Sánchez P., Concha L., Descoteaux M., Mansour S., Seguin C., Zalesky A., Marshall K., Canales-Rodríguez E. J., Wu Y., Ahmad S., Yap P.-T., Théberge A., Gagnon F., Massi F., Fischi-Gomez E., Gardier R., Villarreal Haro J. L., Pizzolato M., Caruyer E., Thiran J.-P.. Tractography passes the test: Results from the diffusion-simulated connectivity (disco) challenge - NeuroImage, 277: 120231, 16 June 2023
de Matos K., Cury C., Chougar L., Strike L.T., Rolland T., Riche M., Hemforth L., Martin A., Banaschewski T., Bokde A.L.W., Desrivières S., Flor H., Grigis A., Garavan H., Gowland P., Heinz A., Brühl R., Martinot J.-L., Paillère Martinot M.-L., Artiges E., Nees F., Papadopoulos Orfanos D., Lemaitre H., Paus T., Poustka L., Hohmann S., Millenet S., Fröhner J.H., Smolka M.N., Vaidya N., Walter H., Whelan R., Schumann G., Frouin V., IMAGEN Consortium, Bach Cuadra M., Colliot O., Couvy-Duchesne B.. Temporo-basal sulcal connections: a manual annotation protocol and an investigation of sexual dimorphism and heritability - Brain Structure and Function, 228: 1459–1478, 26 June 2023
Canales-Rodríguez E. J., Verdolini N., Alonso-Lana S., Torres M. L., Panicalli F., Argila-Plaza I., Rodriguez-Cano E., Montoro I., Garcia-Ruiz B., Jimenez E., Varo C., Lluch A., Del Mar Bonnin C., Maluf S., Pujol M., Jaurrieta Guarner N., Sarró S., Vieta E., Vilella E., Salvador R., Pomarol-Clotet E.. Widespread intra-axonal signal fraction abnormalities in bipolar disorder from multicompartment diffusion MRI: Sensitivity to diagnosis, association with clinical features and pharmacologic treatment - Human Brain Mapping, 44(12): 4605-4622, 26 June 2023
Mohammadi G., Van De Ville D., Vuilleumier P.. Brain networks subserving functional core processes of emotions identified with componential modeling - Cerebral Cortex, 33(12): 7993–8010, 15 June 2023
Liverani MC, Borradori-Tolda C, Ha-Vinh Leuchter R, Thiran JP, Huppi PS, Fischi-Gomez E. Cortical alterations after very preterm birth and the association with socio-emotional abilities from childhood to early adolescence - Cerebral Cortex, : , June 2023
Ferritto C., Preti M. G., Moia S., Van De Ville D., Behjat H.. Brain Fingerprinting Using FMRI Spectral Signatures On High-Resolution Cortical Graphs - 2023 IEEE International Conference on Acoustics, Speech, and Signal Processing Workshops (ICASSPW), : , Rhodes Island, Greece, June 2023
Preti M. G., Bolton T. A. W., Griffa A., Van De Ville D.. Graph Signal Processing For Neurogimaging to Reveal Dynamics of Brain Structure-Function Coupling - International Conference on Acoustics, Speech, and Signal Processing (ICASSP), : , Rhodes Island, Greece, June 2023
Gardier R., Villarreal Haro J. L., Canales‐Rodríguez E. J., Jelescu I. O.,Girard G., Rafael‐Patiño J., Thiran J.-P.. Cellular Exchange Imaging (CEXI): Evaluation of a diffusion model including water exchange in cells using numerical phantoms of permeable spheres - Magnetic Resonance in Medicine, 90(4): 1625-1640, 06 June 2023
Aviyente S., Frangi A. F., Meijering E., Muñoz-Barrutia A., Liebling M., Van De Ville D., Unser M.. From Nano to Macro: An overview of the IEEE Bio Image and Signal Processing Technical Committee - IEEE Signal Processing Magazine, 40(4): 61 - 71, 06 June 2023
Molchanova N., Raina V., La Rosa F., Malinin A., Müller H., Gales M., Granziera C., Graziani M., Bach Cuadra M.. Towards Informative Uncertainty Measures for MRI Segmentation in Clinical Practice: Application to Multiple Sclerosis - ISMRM, : , Toronto, Canada, June 2023
Bohra P., del Aguila Pla P., Giovannelli J.-F., Unser M.. A Statistical Framework to Investigate the Optimality of Signal-Reconstruction Methods - IEEE Transactions on Signal Processing, 71: 2043 - 2055, 01 June 2023
Bolton TA, Van De Ville D, Amico E, Preti MG, Liégeois R. The arrow-of-time in neuroimaging time series identifies causal triggers of brain function - Human Brain Mapping, : , May 2023
Neumayer S., Goujon A., Bohra P., Unser M. Demander à ChatGPT. Approximation of Lipschitz Functions Using Deep Spline Neural Networks - SIAM Journal on Mathematics of Data Science, 5(2): , 15 May 2023
Parhi R., Unser M.. The Sparsity of Cycle Spinning for Wavelet-Based Solutions of Linear Inverse Problems - IEEE Signal Processing Letters, 30: 568 - 572, 12 May 2023
Bohra P., Pham T.-A., Long Y., Yoo J., Unser M. Demander à ChatGPT. Dynamic Fourier ptychography with deep spatiotemporal priors - Inverse Problems, 39(6): , 9 May 2023
Payette K., Li H.B., de Dumast P., Licandro R., Ji H., Siddiquee M.M.R., Xu D., Myronenko A., Liu H., Pei Y., Wang L., Peng Y., Xie J., Zhang H., Dong G., Fu H., Wang G., Rieu Z., Kim D., Kim H.G., Karimi D., Gholipour A., Torres H.R., Oliveira B., Vilaça J.L., Lin Y., Avisdris N., Ben-Zvi O., Ben Bashat D., Fidon L., Aertsen M., Vercauteren T., Sobotka D., Langs G., Alenyà M., Villanueva M.I., Camara O., Specktor Fadida B., Joskowicz L., Weibin L., Yi L., Xuesong L., Mazher M., Qayyum A., Puig D., Kebiri H., Zhang Z., Xu X., Wu D., Liao K., Wu Y., Chen J., Xu Y., Zhao L., Vasung L., Menze B., Bach Cuadra M., Jakab A.. Fetal brain tissue annotation and segmentation challenge results - Medical Image Analysis, 88: , 22 April 2023
De Dumast P., Bach Cuadra M.. Domain Generalization in Fetal Brain MRI Segmentation with Multi-Reconstruction Augmentation - 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), : , Cartagena, Colombia, April 2023
Madrona A., Otálora S., Fischi-Gomez E., Ravano V., Maréchal B., Thiran J.-P., Kober T., Wiest R., McKinley R., Richiardi J., Rafael-Patiño J.. Federated Learning on Heterogeneous Diffusion-Weighted Imaging Data for Acute Stroke Infarct Segmentation - 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), : , Cartagena, April 2023
Molchanova N., Raina V., Malinin A., La Rosa F., Muller H., Gales M., Bach Cuadra M.. Novel Structural-Scale Uncertainty Measures and Error Retention Curves: Application to Multiple Sclerosis - 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), : , Cartagena, Colombia, April 2023
Gardier R, Villarreal Haro JL, Canales-Rodriguez EJ, Jelescu IO, Girard G, Rafael-Patino J, Thiran JP. Cellular EXchange Imaging (CEXI): Evaluation of a diffusion model including water exchange in cells using numerical phantoms of permeable spheres - arXiv:2303.16112 [eess.SP], : , April 2023
Piredda G. F., Caneschi S., Hilbert T., Bonanno G., Joseph A., Egger K., Peter J., Klöppel S., Jehli E., Grieder M., Slotboom J., Seiffge D., Goeldlin M., Hoepner R., Willems T., Vulliemoz S., Seeck M., Venkategowda P. B., Corredor Jerez R. A., Maréchal B., Thiran J.-P., Wiest R., Kober T., Radojewski P.. Submillimeter T1 atlas for subject-specific abnormality detection at 7T - Magnetic Resonance in Medicine, 89(4): 1601-1616, April 2023
Hériard-Dubreuil B., Besson A., Wintzenrieth F., Cohen-Bacrie C., Thiran J.-P.. Refraction-Based Speed of Sound Estimation in Layered Media: An Angular Approach - IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control, 70(6): 486 - 497, 24 March 2023
Marie D., Müller C. A. H., Altenmüller E., Van De Ville D., Jünemann K., Scholz D. S., Krüger T. H. C., Worschech F., Kliegel M., Sinke C., James C. E.. Music interventions in 132 healthy older adults enhance cerebellar grey matter and auditory working memory, despite general brain atrophy - Neuroimage: Reports, 3(100166): , 23 March 2023
Rivier C., Preti M. G., Nicolo P., Van De Ville D., Guggisberg A. G., Pirondini E.. Prediction of post-stroke motor recovery benefits from measures of sub-acute widespread network damages - Brain Communications, 5(fcad055): , 01 March 2023
Evangelista G. G., Egger P., Brügger J., Beanato E., Koch P. J., Ceroni M., Fleury L., Cadic-Melchior A., Meyer N. H., De León Rodríguez D., Girard G., Léger B., Turlan J.-L., Mühl A., Vuadens P., Adolphsen J., Jagella C. E., Constantin C., Alvarez V., San Millán D., Bonvin C., Morishita T., Wessel M. J., Van De Ville D., Hummel F. C.. Differential Impact of Brain Network Efficiency on Poststroke Motor and Attentional Deficits - Stroke, 54(4): , 27 February 2023
Viñals R., Jonnalagedda M., Petignat P., Thiran J.-P., Vassilakos P.. Artificial Intelligence-Based Cervical Cancer Screening on Images Taken during Visual Inspection with Acetic Acid: A Systematic Review - Diagnostics, 13(5): 836, 22 February 2023
Todea A. R., Melie-Garcia L., Barakovic M., Cagol A., Rahmanzadeh R., Galbusera R., Lu P.-J., Weigel M., Ruberte E., Radue E.-W., Schaedelin S., Benkert P., Oezguer Y., Sinnecker T., Müller S., Achtnichts L., Vehoff J., Disanto G., Findling O., Chan A., Salmen A., Pot C., Lalive P., Bridel C., Zecca C., Derfuss T., Remonda L., Wagner F., Vargas M., Du Pasquier R., Pravata E., Weber J., Gobbi C., Leppert D., Wuerfel J., Kober T., Marechal B., Corredor-Jerez R., Psychogios M., Lieb J., Kappos L., Bach Cuadra M., Kuhle J., Granziera C.. A Multicenter Longitudinal MRI Study Assessing LeMan-PV Software Accuracy in the Detection of White Matter Lesions in Multiple Sclerosis Patients - Journal of Magnetic Resonance Imaging, 58(3): 864-876, 28 January 2023
del Aguila Pla P., Neumayer S., Unser M.. Stability of Image-Reconstruction Algorithms - IEEE Transactions on Computational Imaging, 9: 1 - 12, 11 January 2023
Dong J., Valzania L., Maillard A., Pham T.-A., Gigan S., Unser M. Demander à ChatGPT. Phase Retrieval: From Computational Imaging to Machine Learning: A tutorial - IEEE Signal Processing Magazine, 40(1): 45 - 57, 02 January 2023
Unser M.. Ridges, Neural Networks, and the Radon Transform - Journal of Machine Learning Research, 24(37): 1450 - 1482, 01 January 2023
Windel F., Gardier R.M., Fourchard G., Viñals Terres R., D. Bavelier, Padberg F., Rancans E., Bonne O., Nahum M., Thiran J.-P., Morishita T., Hummel F. C.. Computer vision based algorithm to support correct electrode placement for home-based non-invasive electric brain stimulation - Brain Stimulation: Basic, Translational, and Clinical Research in Neuromodulation, 16(1): 243, January 2023
del Aguila Pla P, Boquet-Pujadas A, Jalden J. Convex Quantization Preserves Logconcavity - IEEE Signal Processing Letters, 29: 2697–2701, December 2022
Bulcke CV, Wynen M, Detobel J, La Rosa F, Absinta M, Dricot L, Macq B, Bach Cuadra M, Maggi P. BMAT: An open-source BIDS managing and analysis tool - Neuroimage: Clinical, 36: 2213-1582, October 2022
Dechantsreiter E, Padberg F, Morash A, Kumpf U, Nguyen A, Menestrina Z, Windel F, Burkhardt G, Goerigk S, Morishita T, Soldini A, Ahissar S, Cohen T, Pasqualotto A, Rubene L, Konosonoka L, Keeser D, Zill P, Assi R, Gardier R, Viñals R, Thiran JP, Segman R, Benjamini Y, Bonne O, Hummel FC, Bavelier D, Rancans E, Nahum M. Examining the synergistic effects of a cognitive control video game and a home-based, self-administered non-invasive brain stimulation on alleviating depression: the DiSCoVeR trial protocol - European Archives of Psychiatry and Clinical Neuroscience, 273(1): 85-98, October 2022
Fleury L, Koch PJ, Wessel MJ, Bonvin C, San Millan D, Constantin C, Vuadens P, Adolphsen J, Cadic Melchior A, Brügger J, Beanato E, Ceroni M, Menoud P, De Leon Rodriguez D, Zufferey V, Meyer NH, Egge P, Harquel S, Popa T, Estelle Raffin E, Girard G, Thiran JP, Vaney C, Alvarez V, Turlan JL, Mühl A, Léger B, Morishita T, Micera S, Blanke O, Van De Ville D, Hummel FC. Toward individualized medicine in stroke—The TiMeS project: Protocol of longitudinal, multi-modal, multi-domain study in stroke - Frontiers in Neurology, 13: 939640, September 2022